Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongylus_20vulgaris_20[genbank_20GCA_5F000951515.1_202014-09-25]
167,310 sequences; 291,096,078 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq24732 107 3e-18
>seq24732
Length=2762
Score = 107 bits (118), Expect = 3e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 78969 AATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTC 79028
||| |||||| || || || | | |||||| || || |||| ||| || || |||
Sbjct 537 AATAGATCCATGATTGGCAATCAGCTGATTCTTCATATCCTCATCCCACAAGTTCAACTC 478
Query 79029 GGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCG 79088
| ||| || | || | ||| || ||||| | ||| || || ||||||| |||||| ||
Sbjct 477 GACTAAGTCTTTCAGCAAATGTGGGTTAACAATTTGGAAGTCGCCAGACAGTACTCTACG 418
Query 79089 AGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGT 79148
| |||| || || || || || || | ||||||||||| || | |||||| || ||
Sbjct 417 ACTGTAGATGTTGAAAGTGTAAGGCTCAATAGATTCATTATTGCCAAGAATTTGCGCCGT 358
Query 79149 TGATGCCGTTGGCATAGGTGCCAC 79172
|| || |||||||| ||||||||
Sbjct 357 AGAAGCTGTTGGCATCGGTGCCAC 334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716766630588400
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