Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylus_20vulgaris_20[genbank_20GCA_5F000951515.1_202014-09-25] 167,310 sequences; 291,096,078 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq24732 107 3e-18 >seq24732 Length=2762 Score = 107 bits (118), Expect = 3e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 78969 AATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTC 79028 ||| |||||| || || || | | |||||| || || |||| ||| || || ||| Sbjct 537 AATAGATCCATGATTGGCAATCAGCTGATTCTTCATATCCTCATCCCACAAGTTCAACTC 478 Query 79029 GGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCG 79088 | ||| || | || | ||| || ||||| | ||| || || ||||||| |||||| || Sbjct 477 GACTAAGTCTTTCAGCAAATGTGGGTTAACAATTTGGAAGTCGCCAGACAGTACTCTACG 418 Query 79089 AGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGT 79148 | |||| || || || || || || | ||||||||||| || | |||||| || || Sbjct 417 ACTGTAGATGTTGAAAGTGTAAGGCTCAATAGATTCATTATTGCCAAGAATTTGCGCCGT 358 Query 79149 TGATGCCGTTGGCATAGGTGCCAC 79172 || || |||||||| |||||||| Sbjct 357 AGAAGCTGTTGGCATCGGTGCCAC 334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716766630588400