Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylus_20vulgaris_20[genbank_20GCA_5F000951515.1_202014-09-25] 167,310 sequences; 291,096,078 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq30843 89.7 7e-13 >seq30843 Length=2387 Score = 89.7 bits (98), Expect = 7e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 72793 TTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGTG 72852 |||||||| || || | ||||| || || |||||||| |||||||| ||||| | Sbjct 900 TTTGATACAGCAATACGAGCGGCGAGGATAGCATAATCAGGATGTTGAGTAGTCATTGAT 841 Query 72853 GCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCT 72912 || || ||||||| |||| ||||||||||||| |||| || || || || | |||| Sbjct 840 GCAGCAGTTTCTGCAGCCAAGTTGTCCAATTCTACTGTTGAAACACCTTTGTACAATCCT 781 Query 72913 TGGATAACCTTCATAGCTA 72931 || || |||||||||| Sbjct 780 CCAATTACTTTCATAGCTA 762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 669735596255600