Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylus_20vulgaris_20[genbank_20GCA_5F000951515.1_202014-09-25] 167,310 sequences; 291,096,078 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq7225 82.4 7e-11 >seq7225 Length=5421 Score = 82.4 bits (90), Expect = 7e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 13187 ATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATA 13246 || ||||| || ||| |||| |||||||||||| || ||||| || | |||||| || Sbjct 320 ATCAGCTCATTGGAATGAGTTAAACCCGGCATAAGACCGCGTTTCTTCAGCCAAAAAATG 379 Query 13247 GCAGCAAACGAACCCGaaaaaaaTATTCCTTCA 13279 ||||||||||| || ||||| || |||||| || Sbjct 380 GCAGCAAACGATCCGGAAAAGAAGATTCCTGCA 412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430103587828620