Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongylus_20vulgaris_20[genbank_20GCA_5F000951515.1_202014-09-25]
167,310 sequences; 291,096,078 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq30843 89.7 6e-13
>seq30843
Length=2387
Score = 89.7 bits (98), Expect = 6e-13
Identities = 103/139 (74%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 63987 TTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTG 64046
|||||||| || || | ||||| || || |||||||| |||||||| ||||| |
Sbjct 900 TTTGATACAGCAATACGAGCGGCGAGGATAGCATAATCAGGATGTTGAGTAGTCATTGAT 841
Query 64047 GCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCT 64106
|| || |||| || |||| ||||||||||||| |||| || || || || | ||||
Sbjct 840 GCAGCAGTTTCTGCAGCCAAGTTGTCCAATTCTACTGTTGAAACACCTTTGTACAATCCT 781
Query 64107 TGAATAACCTTCATAGCTA 64125
||| || ||||||||||
Sbjct 780 CCAATTACTTTCATAGCTA 762
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 621644383799600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |