Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylus_20vulgaris_20[genbank_20GCA_5F000951515.1_202014-09-25] 167,310 sequences; 291,096,078 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq30843 93.3 5e-14 >seq30843 Length=2387 Score = 93.3 bits (102), Expect = 5e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 63842 TTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTG 63901 |||||||| || || | |||||| || || |||||||| |||||||| ||||| | Sbjct 900 TTTGATACAGCAATACGAGCGGCGAGGATAGCATAATCAGGATGTTGAGTAGTCATTGAT 841 Query 63902 GCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCCT 63961 || || |||| || |||| ||||||||||||| |||| ||||| || || | |||| Sbjct 840 GCAGCAGTTTCTGCAGCCAAGTTGTCCAATTCTACTGTTGAAACACCTTTGTACAATCCT 781 Query 63962 TGGATAACCTTCATAGCTA 63980 || || |||||||||| Sbjct 780 CCAATTACTTTCATAGCTA 762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632306837876000