Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylus_20vulgaris_20[genbank_20GCA_5F000951515.1_202014-09-25] 167,310 sequences; 291,096,078 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq7225 89.7 6e-13 >seq7225 Length=5421 Score = 89.7 bits (98), Expect = 6e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 93593 ACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGA 93652 || || || |||||||||||||| || | ||||| ||||| | |||| ||||| ||| Sbjct 1083 ACCTCCTCAACAGTCCAAAACGACGCAACAGCTTTCTTGTAGAATGCCCAGATGTCATGA 1142 Query 93653 TATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCT 93706 |||| || || || || |||||||||||||| || || || | ||| |||||| Sbjct 1143 TATTTAAGAGGGAAAATAACAAAACGATTAGGATTTTCCTTCAATAAAGGCTCT 1196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555696195244400