Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylus_20vulgaris_20[genbank_20GCA_5F000951515.1_202014-09-25] 167,310 sequences; 291,096,078 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq48601 82.4 5e-11 >seq48601 Length=1711 Score = 82.4 bits (90), Expect = 5e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 21972 GGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACT 22031 ||||||||||| |||||| ||| | || ||||||||||| |||||||| |||||| Sbjct 308 GGCAAACAACTCGAAGATGGTCGTACTCTTGCGGATTACAATATCCAGAAGGAGTCTACT 367 Query 22032 CTTCATATGGTATTACGTTTACGAGGAGGA 22061 |||||| | ||| | ||| | ||||||||| Sbjct 368 CTTCATCTAGTACTTCGTCTTCGAGGAGGA 397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357394551077740