Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylus_20vulgaris_20[genbank_20GCA_5F000951515.1_202014-09-25] 167,310 sequences; 291,096,078 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq7225 84.2 3e-11 >seq7225 Length=5421 Score = 84.2 bits (92), Expect = 3e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 37439 ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGC 37498 |||| | || || || ||||| ||| ||||||||||| || || || |||||||| || Sbjct 722 ATCTCTGATGTAGGTTTCAATCAGTTTGCTATACATTTCTGAATGTATGTTTTCAATGGC 781 Query 37499 TATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTaaaaaa 37552 |||||||| |||||||| | | |||||||| || ||| || || | | |||| Sbjct 782 AATCTGAAAGCCATAAAAGAAGCGAGCTTCAGGTACTTGCACTTCTTGAGAAAA 835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591078043452400