Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylus_20vulgaris_20[genbank_20GCA_5F000951515.1_202014-09-25] 167,310 sequences; 291,096,078 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq76979 87.8 3e-12 >seq76979 Length=1169 Score = 87.8 bits (96), Expect = 3e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 212900 CAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGA 212959 || ||||||||| || || |||||||| || || || ||||| | ||| | ||| | Sbjct 1087 CAAGTGAGGGTTAACAATTTGGAAGTCGCCAGAAAGTACCCTTCGGCTGTAGATGTTGAA 1028 Query 212960 AGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCAT 213019 |||||||||||| ||| || ||||| || || || || || || ||||| ||||| Sbjct 1027 AGTGTAGGGCTCAATGGATTCATTGTTGCCAAGGATTTGGGCCGTAGAAGCTGTTGGCAT 968 Query 213020 GGGAGCCACCAGGAGACTGTTCCTCACTCCGTG 213052 || ||||| || || ||||| | ||||| || Sbjct 967 CGGTGCCACGAGAAGGCTGTTGCGGACTCCATG 935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 929584615590400