Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylus_20vulgaris_20[genbank_20GCA_5F000951515.1_202014-09-25] 167,310 sequences; 291,096,078 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq21886 286 1e-71 seq54088 181 3e-40 seq51722 181 3e-40 seq48601 138 3e-27 seq150301 127 6e-24 seq84433 122 3e-22 seq133353 120 9e-22 seq75105 120 9e-22 seq52966 104 7e-17 seq150799 96.9 1e-14 >seq21886 Length=2983 Score = 286 bits (316), Expect = 1e-71 Identities = 677/1014 (67%), Gaps = 14/1014 (1%) Strand=Plus/Minus Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 |||||||| || ||||| || || || || ||||| | || ||| || || |||||| Sbjct 1778 GATGCTGTCATCACTGTCCCTGCTTACTTCAATGACTCTCAACGTCAGGCTACCAAAGAT 1719 Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 || || ||| | || | |||||||| |||| || || ||||||||||| || || Sbjct 1718 GCCGGTGCCATCTCAGGAATGAATGTTCTTCGAATTATCAACGAACCCACTGCAGCTGCT 1659 Query 349727 ATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaa--aaTATTCTTATTTTTGATT 349784 || || || || || || || | || ||| | || | || | |||||||| ||| Sbjct 1658 ATCGCCTACGGTCTCGACAAGA--AGGGACAAGGAGAGCGCAACGTCCTTATTTTCGATC 1601 Query 349785 TAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTA 349844 | || |||||||| || ||||| || | || || | || || |||||||| ||||| | Sbjct 1600 TCGGAGGTGGTACCTTCGATGTCTCTATCCTGACTATCGAGGATGGAATTTTCGAAGTAA 1541 Query 349845 AAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGC 349904 | | |||||||||||||| |||||||| |||||||| ||||| || || | || | Sbjct 1540 AGTCTACTGCTGGTGATACTCATCTTGGAGGAGAAGACTTTGACAACCGAATGGTCAACC 1481 Query 349905 ATTTTGTTAAAGAATTTAAGCGTCAAGCTAAA-ATTGATATTGGAGATAATCCTAGAGCA 349963 | ||||| ||||| || || ||||| || | ||| | ||| ||| | || Sbjct 1480 ACTTTGTCGCCGAATTCAAACG-CAAGCACAAGAAAGATCTCAACACTAACCCTCGTGCC 1422 Query 349964 ATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAA 350023 | ||||| || | || || || || ||||| |||||| || | || || | | || Sbjct 1421 CTCCGTCGTCTCCGCACCGCTTGCGAGCGTGCCAAGCGTACCCTCTCTTCGTCATCTCAG 1362 Query 350024 ACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGT 350083 | || |||||||| || || || ||| || | || |||| | || || ||| Sbjct 1361 GCTTCAATTGAAATCGACTCGCTGTTTGAGGGTATTGACTTCTACACTAACATCACTCGT 1302 Query 350084 GCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAA 350143 ||||| |||||||| | || ||||| || | | || ||||| |||||||| || Sbjct 1301 GCTCGTTTTGAAGAGCTGTGCGCTGATCTCTTCCGTTCTACCATGGACCCTGTGGAGAA- 1243 Query 350144 GTAT-TAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGG 350202 || | | | ||||| |||||| ||| | |||||| |||| | || || || || || Sbjct 1242 GTCTCTGAGGGATGCTAAAATGGACAAGAGTCAGATCCATGATATTGTCTTGGTCGGAGG 1183 Query 350203 TTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACC 350262 ||| || ||||| || || || ||| || | || || || |||| ||| || |||| Sbjct 1182 TTCCACTCGTATCCCTAAGGTGCAAAAGCTCCTTTCGGATCTTTTCTCTGGAAAGGAACT 1123 Query 350263 TTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTAT 350322 | || || || || ||||||||||| || || ||||| ||||| || || |||| Sbjct 1122 GAACAAGTCCATCAACCCCGATGAAGCTGTCGCCTACGGTGCGGCTGTGCAAGCTGCTAT 1063 Query 350323 TTTATCTGGAAATAAGAGTTCTAAAATTG---ATGATCTATTACTACTAGATGTAACTCC 350379 | || || | ||| || || || | ||||| | || || ||||| |||| Sbjct 1062 CCTTTCCGGTGACAAG---TCAGAAGCTGTGCAAGATCTCCTGCTTCTCGATGTTGCTCC 1006 Query 350380 ACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAG 350439 ||||||||||| | || || | || | || ||||| | ||| || || || | Sbjct 1005 TCTTTCGCTTGGTATCGAGACCGCCGGAGGTGTGATGACCGCTCTAATCAAGAGGAACAC 946 Query 350440 TACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGT 350499 || | || || || | ||| || || | || | | | || || || || | || Sbjct 945 GACCATCCCCACCAAGACCAGCCAGACATTCACCACGTATTCCGACAACCAACCTGGCGT 886 Query 350500 AACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGA 350559 | || || || |||||||| || |||||| || || || || ||| |||||| | Sbjct 885 ACTTATCCAGGTCTTTGAAGGAGAGCGTGCTATGACCAAGGACAACAATCTCCTTGGAAA 826 Query 350560 ATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGT 350613 ||| || || |||||| ||| |||| | ||||| ||||| ||||| || Sbjct 825 GTTTGAGCTGTCTGGAATTCCGCCAGCGCCTCGTGGAGTACCTCAAATTGAGGT 772 Score = 132 bits (146), Expect = 1e-25 Identities = 362/551 (66%), Gaps = 10/551 (2%) Strand=Plus/Plus Query 183246 ATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGAT 183305 || |||||||| ||||| ||||| || || ||||||||||| ||||| | || || | | Sbjct 1063 ATAGCAGCTTGCACAGCCGCACCGTAGGCGACAGCTTCATCGGGGTTGA-TGGACTTGTT 1121 Query 183306 -AATTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGA 183364 | ||| || ||| |||| || ||||| | | ||| | || || || | ||| || Sbjct 1122 CAGTTCCTTTCCAGAGAAAAGATCCGAAAGGAGCTTTTGCACCTTAGGGATACGAGTGGA 1181 Query 183365 ACCACCGACTAATACTACTTCATCGATATTACTTTTACTAATTTGTGAATCTTTTAAAAC 183424 ||| ||||| || || | |||| ||| | ||| || |||| | ||| | | | Sbjct 1182 ACCTCCGACCAAGACAATATCATGGATCTGACTCTTGTCCATTTTAGCATCCCTCAGAGA 1241 Query 183425 TTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGC 183484 || || ||||||||||| || | || | ||| || | |||||| || | || Sbjct 1242 CTTCTCCACAGGGTCCATGGTAGAACGGAAGAGATCAGCGCACAGCTCTTCAAAACGAGC 1301 Query 183485 TCTAGTTAAAGATGaaa----aaaaGTCAATACCATTATATAAGGAATCAATTTCAATCG 183540 | ||| |||| | | ||||||||||| | | | | || || |||||||| | Sbjct 1302 ACGAGT----GATGTTAGTGTAGAAGTCAATACCCTCAAACAGCGAGTCGATTTCAATTG 1357 Query 183541 ATGTTTGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGAC 183600 | | || | || || || | || | || || || || || || || | || |||| Sbjct 1358 AAGCCTGAGATGACGAAGAGAGGGTACGCTTGGCACGCTCGCAAGCGGTGCGGAGACGAC 1417 Query 183601 GTAATGATCTTGGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAA 183660 | | | | || ||| | | ||||| || || || | ||| ||||| | | || Sbjct 1418 GGAGGGCACGAGGGTTAGTGTTGAGATCTTTCTTGTGCTTGCGTTTGAATTCGGCGACAA 1477 Query 183661 AATGTTGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAG 183720 | || | | | || | ||||| ||||| || || | ||| ||||| |||||||||| Sbjct 1478 AGTGGTTGACCATTCGGTTGTCAAAGTCTTCTCCTCCAAGATGAGTATCACCAGCAGTAG 1537 Query 183721 CTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCAC 183780 || ||||| || ||||| || || ||| | | || || ||||| || |||||||| | Sbjct 1538 ACTTTACTTCGAAAATTCCATCCTCGATAGTCAGGATAGAGACATCGAAGGTACCACCTC 1597 Query 183781 CCAAATCAAAA 183791 | | ||| ||| Sbjct 1598 CGAGATCGAAA 1608 >seq54088 Length=1574 Score = 181 bits (200), Expect = 3e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 |||||||| ||||| || ||||| ||||| |||||||| || || ||||| || || || Sbjct 185 AGAACAAGGTGAAGCGTTGACTCCTTTTGGATATTATAGTCGGACAATGTACGACCGTCC 244 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || ||||| |||||||||||||| || || |||||||||||||||||||| || ||||| Sbjct 245 TCGAGTTGCTTTCCAGCAAAGATCAGTCGCTGCTGATCAGGAGGAATTCCCTCCTTATCT 304 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 ||||| || || || ||||| ||||| | || || | || ||||| || || | ||| Sbjct 305 TGAATCTTGGCCTTCACATTCTCAATAGTGTCCGACGCCTCTACTTCCAGGGTTATCGTC 364 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||||| || | || || |||||||| |||||| Sbjct 365 TTTCCAGTCAAAGTCTTGACAAAAATTTGCATT 397 Score = 100 bits (110), Expect = 9e-16 Identities = 110/145 (76%), Gaps = 1/145 (1%) Strand=Plus/Plus Query 140594 TTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTT 140653 ||| |||||||| || || || || ||||| || ||||||||||| || ||||| ||||| Sbjct 538 TTTACCAGCAAAAATCAGTCGCTGTTGATCTGGTGGAATTCCTTCCTTGTCCTGGATTTT 597 Query 140654 AGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 |||||||| || || || | || |||| |||||| || || |||| ||| | || || Sbjct 598 GGCTTTTACGTTTTCGATTGTGTCGGATGCTTCAACCTCGAGAGTAATAGTCCTGCCAGT 657 Query 140714 TAGTGTTTTTACAAAAATCTGCATT 140738 || || || || || |||||||| Sbjct 658 GAGAGTCTTAAC-GAAGTCTGCATT 681 >seq51722 Length=1631 Score = 181 bits (200), Expect = 3e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 |||||||| ||||| || ||||| ||||| |||||||| || || ||||| || || || Sbjct 183 AGAACAAGGTGAAGCGTTGACTCCTTTTGGATATTATAGTCGGACAATGTACGACCGTCC 242 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || ||||| |||||||||||||| || || |||||||||||||||||||| || ||||| Sbjct 243 TCGAGTTGCTTTCCAGCAAAGATCAGTCGCTGCTGATCAGGAGGAATTCCCTCCTTATCT 302 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 ||||| || || || ||||| ||||| | || || | || ||||| || || | ||| Sbjct 303 TGAATCTTGGCCTTCACATTCTCAATAGTGTCCGACGCCTCTACTTCCAGGGTTATCGTC 362 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||||| || | || || |||||||| |||||| Sbjct 363 TTTCCAGTCAAAGTCTTGACAAAAATTTGCATT 395 Score = 122 bits (134), Expect = 3e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || |||||||| | || ||||||||||||||||| || || |||||||| ||||||||| Sbjct 1490 CCGGCAAAGATCAATCGCTGCTGATCAGGAGGAATCCCCTCCTTATCCTGGATTTTAGCT 1549 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || || || || || | ||||||| ||| ||||| || || | ||||| ||||| || Sbjct 1550 TTGACGTTCTCTATTGTGTCAGATGCTTCGACTTCGAGCGTTATGGTCTTCCCGGTGAGA 1609 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || || || ||||||||||| Sbjct 1610 GTCTTGACGAAAATCTGCAT 1629 Score = 118 bits (130), Expect = 3e-21 Identities = 113/145 (78%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 140594 TTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTT 140653 ||| |||||||| || || || || ||||| || ||||||||||| |||||||| ||||| Sbjct 539 TTTACCAGCAAAAATCAGTCGCTGTTGATCTGGTGGAATTCCTTCCTTATCCTGGATTTT 598 Query 140654 AGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 |||||||| || || || | || |||| |||||| || || |||| ||||| || || Sbjct 599 GGCTTTTACGTTCTCGATTGTGTCGGATGCTTCAACCTCGAGAGTAATAGTCTTGCCAGT 658 Query 140714 TAGTGTTTTTACAAAAATCTGCATT 140738 || || || || || ||||||||| Sbjct 659 GAGAGTCTTAACGAAGATCTGCATT 683 Score = 114 bits (126), Expect = 4e-20 Identities = 110/141 (78%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || ||||| || | | ||| ||||| |||||||| |||||||||||||| || || ||| Sbjct 847 CCTGCAAAAATCAATCTTTGTTGATCTGGAGGAATCCCTTCTTTATCCTGGATCTTGGCT 906 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || || || ||||| | ||||||| |||||||| || || | ||| ||||| || || Sbjct 907 TTGACGTTCTCAATTGTGTCAGATGCCTCAACTTCGAGAGTGATTGTTTTTCCAGTAAGA 966 Query 140718 GTTTTTACAAAAATCTGCATT 140738 || || ||||| ||||||||| Sbjct 967 GTCTTCACAAAGATCTGCATT 987 Score = 100 bits (110), Expect = 9e-16 Identities = 86/105 (82%), Gaps = 1/105 (1%) Strand=Plus/Plus Query 140495 ACTAATATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTG 140554 || ||||||| ||| |||||||| | ||||| |||||||||||||| |||||||| || Sbjct 1272 ACGAATATTTG-CATTCCACCACGAAGTCTTAATACAAGATGAAGAGTCGACTCTTTCTG 1330 Query 140555 AATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCC 140599 ||| || ||||| || | || || |||||||| ||||||||||| Sbjct 1331 AATGTTGTAATCGGACAGAGTGCGGCCATCTTCCAGTTGTTTTCC 1375 Score = 93.3 bits (102), Expect = 1e-13 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | || || || |||||||||||||||||||| || || || ||||| Sbjct 984 CATTCCACCACGAAGTCGAAGTACCAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATC 1043 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAA 140605 || | ||| || ||||||||||| || ||||| ||||| Sbjct 1044 TGAGAGTGTGCGGCCATCTTCAAGCTGCTTTCCTGCAAA 1082 >seq48601 Length=1711 Score = 138 bits (152), Expect = 3e-27 Identities = 117/144 (81%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || ||||||||||| ||||||||||||||||||||||||||||| || || || || ||| Sbjct 1388 TTACCAGCAAAGATGAGACGTTGCTGATCAGGAGGAATTCCTTCCTTGTCTTGGATCTTA 1329 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 || || ||||| ||||| | || || | ||| ||||| || |||| ||| || || || Sbjct 1328 GCCTTCACATTCTCAATGGTGTCCGAAGCTTCGACTTCGAGGGTAATTGTTTTCCCTGTC 1269 Query 140715 AGTGTTTTTACAAAAATCTGCATT 140738 ||||| || ||||| ||||||||| Sbjct 1268 AGTGTCTTCACAAAGATCTGCATT 1245 Score = 134 bits (148), Expect = 4e-26 Identities = 116/144 (81%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || |||||||| || ||||||||||||||||| || |||||||| ||||||||||| ||| Sbjct 1024 TTACCAGCAAAAATCAGACGTTGCTGATCAGGCGGGATTCCTTCCTTATCCTGAATCTTA 965 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 || ||||| || || |||| ||||| | ||||||||| | || | |||||||| || Sbjct 964 GCCTTTACGTTCTCGATCGTGTCAGAAGCTTCAACTTCCAAAGTGATGGTCTTTCCAGTC 905 Query 140715 AGTGTTTTTACAAAAATCTGCATT 140738 | ||||| || || ||||||||| Sbjct 904 AACGTTTTCACGAAGATCTGCATT 881 Score = 116 bits (128), Expect = 1e-20 Identities = 112/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654 || || |||||||| || |||||||||||||| ||||| || || || || ||||| ||| Sbjct 540 TTACCGGCAAAGATAAGTCGTTGCTGATCAGGTGGAATACCCTCCTTGTCTTGAATCTTA 481 Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714 ||||||||||| || || | ||| || | || ||||| ||||| | |||||||| || Sbjct 480 GCTTTTACATTTTCGATTGTATCTGAAGCCTCGACTTCGAGTGTGATAGTCTTTCCTGTC 421 Query 140715 AGTGTTTTTACAAAAATCTGCATT 140738 | || || || || ||||||||| Sbjct 420 AACGTCTTCACGAAGATCTGCATT 397 >seq150301 Length=587 Score = 127 bits (140), Expect = 6e-24 Identities = 112/140 (80%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 |||||||| || | || || |||||||| || |||||||| || ||||||||||| ||| Sbjct 515 CCAGCAAAAATCAATCGCTGTTGATCAGGTGGGATTCCTTCCTTGTCCTGAATTTTTGCT 456 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| ||||| | ||| || | ||| || ||||| || | |||||||| || || Sbjct 455 TTCACATTTTCAATTGTATCCGAGGCTTCCACCTCAAGGGTGATCGTCTTTCCAGTAAGC 396 Query 140718 GTTTTTACAAAAATCTGCAT 140737 ||||||||||| |||||||| Sbjct 395 GTTTTTACAAAGATCTGCAT 376 >seq84433 Length=1073 Score = 122 bits (134), Expect = 3e-22 Identities = 252/373 (68%), Gaps = 4/373 (1%) Strand=Plus/Plus Query 349516 ACAA-AAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAA 349574 |||| ||||| || ||||||||||||||| | |||||| | | || |||||||||| Sbjct 419 ACAAGAAACAGTTCACACCCGAAGAAATTTCGGCTATGGTTCTCGGAAAGATGAAGGAAA 478 Query 349575 TTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATT 349634 |||| || | ||| | || | ||| | | ||||| | ||||| || ||||| | Sbjct 479 TTGCCGAGTCCTATCTTGGAAAGGAAGTGAAACACGCTGTAGTAACTGTTCCTGCCTACT 538 Query 349635 TTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTC 349694 | || |||||||| ||| || || || || || || | ||| || || | |||||| Sbjct 539 TCAACGATGCCCAACGTCAAGCCACCAAGGACGCCGGAACCATCGCTGGACTTAATGTTG 598 Query 349695 TAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTG 349754 || |||| || || || || ||||| || || || || || || ||||| || || | Sbjct 599 TACGAATTATCAACGAGCCAACTGCAGCCGCTATCGCCTACGGTCTTGACAA---GAAGG 655 Query 349755 ACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTAC 349814 | ||| || || || | || || || || |||||||| |||||||| || | | Sbjct 656 AAGGAGAGCGCAACATCCTCGTATTCGACTTGGGAGGTGGTACCTTTGATGTGTCTATGC 715 Query 349815 TAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTG 349874 | || | || | || | || ||||| || ||| || || || || | || | Sbjct 716 TTACCATCGACAACGGTGTATTCGAAGTATTGGCCACTAACGGAGACACCCACTTGGGAG 775 Query 349875 GAGAAGATTTTGA 349887 | ||||||||||| Sbjct 776 GTGAAGATTTTGA 788 >seq133353 Length=689 Score = 120 bits (132), Expect = 9e-22 Identities = 111/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||||||||| || || |||||||| || ||||| ||||| |||||||||||||| || Sbjct 259 CCAGCAAAGATAAGTCGCTGCTGATCCGGTGGAATGCCTTCCTTATCCTGAATTTTGGCC 318 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || || || ||||||| || || | ||||||||| | || | ||||||||| || || Sbjct 319 TTCACGTTCTCAATCGTGTCGGACGCTTCAACTTCCAACGTGATTGTCTTTCCAGTCAGA 378 Query 140718 GTTTTTACAAAAATCTGCATT 140738 || || || || || |||||| Sbjct 379 GTCTTCACGAAGATTTGCATT 399 >seq75105 Length=1195 Score = 120 bits (132), Expect = 9e-22 Identities = 111/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||||||||| || || |||||||| || ||||| ||||| |||||||||||||| || Sbjct 432 CCAGCAAAGATAAGTCGCTGCTGATCCGGTGGAATGCCTTCCTTATCCTGAATTTTGGCC 373 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || || || ||||||| || || | ||||||||| | || | ||||||||| || || Sbjct 372 TTCACGTTCTCAATCGTGTCGGACGCTTCAACTTCCAACGTGATTGTCTTTCCAGTCAGA 313 Query 140718 GTTTTTACAAAAATCTGCATT 140738 || || || || || |||||| Sbjct 312 GTCTTCACGAAGATTTGCATT 292 Score = 104 bits (114), Expect = 7e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 140594 TTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTT 140653 ||| || |||||||| || | |||||||| || ||||| ||||| || || || || || Sbjct 740 TTTACCGGCAAAGATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCTTGGATCTT 681 Query 140654 AGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 ||||||||||| ||||| | || || | || |||||||| || | |||||||| || Sbjct 680 TGCTTTTACATTCTCAATAGTGTCCGAAGCCTCCACTTCAAGAGTGATGGTCTTTCCAGT 621 Query 140714 TAGTGTTTTTACAAAAATCTGCATT 140738 || || || ||||| || |||||| Sbjct 620 CAGCGTCTTCACAAAGATTTGCATT 596 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || || ||||| || | || || || || ||||| ||||| || ||||| || || ||| Sbjct 1055 CCGGCGAAGATAAGTCTCTGTTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCT 996 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| ||||| | |||||| | ||||| || | || | ||| || || || | | Sbjct 995 TTCACATTCTCAATGGTATCAGAAGCCTCAACCTCCAAGGTGATTGTTTTCCCAGTCAAT 936 Query 140718 GTTTTTACAAAAATCTGCATT 140738 ||||| || |||||||||||| Sbjct 935 GTTTTCACGAAAATCTGCATT 915 >seq52966 Length=1601 Score = 104 bits (114), Expect = 7e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||| ||||| ||||||||||| || |||||||| || ||||| || || || ||||| Sbjct 1123 CCAGCGAAGATAAGACGTTGCTGGTCTGGAGGAATACCCTCTTTGTCTTGGATCTTAGCC 1064 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| || || | || || | || || || || |||| ||||| || || || Sbjct 1063 TTCACATTTTCTATAGTGTCCGAAGCCTCGACCTCGAGGGTAATAGTCTTCCCCGTAAGA 1004 Query 140718 GTTTTTACAAAAATCTGCATTA 140739 ||||| ||||| || ||||||| Sbjct 1003 GTTTTCACAAAGATTTGCATTA 982 >seq150799 Length=584 Score = 96.9 bits (106), Expect = 1e-14 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || || ||||| || | ||||| || || ||||| ||||| || ||||| || || ||| Sbjct 444 CCGGCGAAGATAAGTCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCT 385 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| ||||| | |||||| | ||||| || | || | ||| || || || | | Sbjct 384 TTCACATTCTCAATGGTATCAGAAGCCTCAACCTCCAAGGTGATTGTTTTCCCAGTCAAT 325 Query 140718 GTTTTTACAAAAATCTGCATT 140738 ||||| || |||||||||||| Sbjct 324 GTTTTCACGAAAATCTGCATT 304 Score = 89.7 bits (98), Expect = 2e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 140594 TTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTT 140653 ||| || |||||||| || | |||||||| || ||||| ||||| || || || || || Sbjct 129 TTTACCGGCAAAGATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCTTGGATCTT 70 Query 140654 AGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 ||||||||||| ||||| | || || | || |||||||| || | |||||||| || Sbjct 69 TGCTTTTACATTCTCAATAGTGTCCGAAGCCTCCACTTCAAGGGTGATGGTCTTTCCAGT 10 Query 140714 TAGTGTTTT 140722 || || || Sbjct 9 CAGCGTCTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1512006210699930