Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylus_20vulgaris_20[genbank_20GCA_5F000951515.1_202014-09-25] 167,310 sequences; 291,096,078 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq7225 100 2e-16 >seq7225 Length=5421 Score = 100 bits (110), Expect = 2e-16 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 4818 ATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGA 4877 || || || || || ||| |||||||||||| |||||||| ||||| || ||||||||| Sbjct 729 ATGTAGGTTTCAATCAGTTTGCTATACATTTCTGAATGTATGTTTTCAATGGCAATCTGA 788 Query 4878 AATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTA 4932 || || |||||| | | |||||| | |||||| ||||| | | |||| | ||||| Sbjct 789 AAGCCATAAAAGAAGCGAGCTTCAGGTACTTGCACTTCTTGAGAAAAGCGTTCTA 843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426178807164230