Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Strongylus_20vulgaris_20[genbank_20GCA_5F000951515.1_202014-09-25] 167,310 sequences; 291,096,078 total letters Query= NC_031019.1 Length=41809 Score E Sequences producing significant alignments: (Bits) Value seq145223 136 1e-27 >seq145223 Length=617 Score = 136 bits (150), Expect = 1e-27 Identities = 119/148 (80%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 30653 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCAGTTAAATCAAATAC 30712 |||||||||||||||||||||||||||||||||||||||||||||| | ||||||| | Sbjct 148 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATTAAAATCAATAAG 89 Query 30713 TTATGTATTATTCGTGCCTTCCTTATTTTTACTGTGGGACATATTTGGGACAGAAGTACC 30772 ||| || ||| || |||||||||||||| ||||||| ||||||||| || | Sbjct 88 TTACACATCATTAGTACCTTCCTTATTTTTTGACTGGGACAAATTTGGGACCGATGGGTT 29 Query 30773 AAAAATCGAGTCAATTTGTCGAGCATGT 30800 | |||||||| ||||| || || ||| Sbjct 28 CAGGATCGAGTCTATTTGCCGTGCGTGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133401629171620