Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Strongylus_20vulgaris_20[genbank_20GCA_5F000951515.1_202014-09-25]
167,310 sequences; 291,096,078 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq24732 125 1e-23
seq76979 98.7 1e-15
>seq24732
Length=2762
Score = 125 bits (138), Expect = 1e-23
Identities = 149/202 (74%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 75655 ATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATT 75714
|||||| || || |||| |||||| || |||| ||| || | || | ||| || ||
Sbjct 510 ATTCTTCATATCCTCATCCCACAAGTTCAACTCGACTAAGTCTTTCAGCAAATGTGGGTT 451
Query 75715 AACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTC 75774
||||||||| || || ||||||| |||||| ||| |||| || || || || || ||
Sbjct 450 AACAATTTGGAAGTCGCCAGACAGTACTCTACGACTGTAGATGTTGAAAGTGTAAGGCTC 391
Query 75775 CACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAA 75834
| ||||||||| || || | |||||| || || ||||| || ||||| |||||||| |
Sbjct 390 AATAGATTCATTATTGCCAAGAATTTGCGCCGTAGAAGCTGTTGGCATCGGTGCCACAAG 331
Query 75835 TAAACTATTTCTGAGACCATGT 75856
| ||| || | || |||||||
Sbjct 330 AAGACTGTTGCGGACACCATGT 309
>seq76979
Length=1169
Score = 98.7 bits (108), Expect = 1e-15
Identities = 128/177 (72%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 75655 ATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATT 75714
|||||| || || |||| |||||| || |||| || || | || | ||||| ||
Sbjct 1135 ATTCTTCATATCCTCATCCCACAAGTTCAACTCGACCAAGTCTTTCAGCAAGTGAGGGTT 1076
Query 75715 AACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTC 75774
||||||||| || || ||||| | ||| ||||| |||| || || || || || ||
Sbjct 1075 AACAATTTGGAAGTCGCCAGAAAGTACCCTTCGGCTGTAGATGTTGAAAGTGTAGGGCTC 1016
Query 75775 CACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCAC 75831
| ||||||||||| || | ||||| || || ||||| || ||||| ||||||||
Sbjct 1015 AATGGATTCATTGTTGCCAAGGATTTGGGCCGTAGAAGCTGTTGGCATCGGTGCCAC 959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 711443386819200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |