Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1685 134 2e-26 >seq1685 Length=49379 Score = 134 bits (148), Expect = 2e-26 Identities = 159/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 || ||| | ||||||||| ||| || | |||||||| || | |||||||||||| ||| Sbjct 5838 TCAAACACATCTCCCCAACAATCATCCAGACCAGGACAATCATGAGGACACATCAATGAC 5779 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT-AAA 79979 ||| | |||| || ||||| ||||||||| ||||| |||||||| | | | || ||| Sbjct 5778 CACATTTGATCAGTCTCTACTCTTTTCATAAAAAGATCGGGAATCCACA-ATCCATAAAA 5720 Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039 || |||||| | || | || || || |||||||||| || || || || |||| Sbjct 5719 TAAATCTCTAGCTCGGTCTTCTTCTGACCCAATATTCTTTTTGAGCTCAAGAAAATCCAT 5660 Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGC 80072 |||||| | |||||| || |||||||| || || Sbjct 5659 AATATCTGCATGCCATGGCTCCAAGTAGATAGC 5627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718134034816400