Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq14890 95.1 3e-14 seq8124 87.8 4e-12 seq14918 84.2 5e-11 seq10171 84.2 5e-11 >seq14890 Length=108563 Score = 95.1 bits (104), Expect = 3e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 104420 CCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479 ||||||||||| || | ||| ||||| || || |||||||| || ||||||||||| || Sbjct 69742 CCAGCAAAAATGAGTCGCTGCTGATCTGGTGGAATTCCTTCCTTGTCCTGAATCTTAGCC 69683 Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 || ||||| || | || || || || || || | || || ||||| || || | | Sbjct 69682 TTCACATTCTCGATTGTGTCCGAAGCCTCGACTTCCAACGTGATCGTCTTGCCCGTCAAT 69623 Query 104540 GTTTTTACAAATATCTGCATTT 104561 ||||| ||||| || ||||||| Sbjct 69622 GTTTTGACAAAGATTTGCATTT 69601 >seq8124 Length=14328 Score = 87.8 bits (96), Expect = 4e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 104420 CCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT 104479 || || ||||| || ||||| || || ||||| || || || || ||||||||||| || Sbjct 8653 CCTGCGAAAATCAGTCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTAGCC 8594 Query 104480 TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGT 104539 || ||||| || | ||| || | || || || || ||||| ||||| ||||| | | Sbjct 8593 TTGACATTCTCAATGGTGTCAGACGCCTCCACTTCGAGCGTAATTGTCTTGCCAGTCAAT 8534 Query 104540 GTTTTTACAAATATCTGCATT 104560 || || ||||| || |||||| Sbjct 8533 GTCTTGACAAAGATTTGCATT 8513 >seq14918 Length=33047 Score = 84.2 bits (92), Expect = 5e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || |||||||| || | | ||| || || || || || ||||||||||| || || || Sbjct 542 TTACCAGCAAAGATCAATCGCTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGGATTTTA 483 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 || || |||||||| | ||| || | || || || || ||||| || || ||||| Sbjct 482 GCCTTCACATTTTCGATGGTGTCAGACGCCTCCACTTCGAGCGTAATTGTTTTGCCAGTC 423 Query 104537 AGTGTTTTTACAAATATCTGCATT 104560 ||||| || || || ||||||||| Sbjct 422 AGTGTCTTAACGAAGATCTGCATT 399 >seq10171 Length=5186 Score = 84.2 bits (92), Expect = 5e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || |||||||| || | | ||| ||||| || || || || || || ||||||||||| Sbjct 639 TTACCAGCAAAGATCAATCGCTGCTGATCTGGCGGAATGCCCTCCTTGTCCTGAATCTTG 580 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 || || || || || | ||| || | || || || || ||||| ||||| ||||| Sbjct 579 GCCTTGACGTTCTCGATGGTGTCAGACGCCTCCACTTCGAGCGTAATTGTCTTGCCAGTC 520 Query 104537 AGTGTTTTTACAAATATCTGCATT 104560 ||||| || ||||| || |||||| Sbjct 519 AGTGTCTTGACAAAGATTTGCATT 496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151176968097080