Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1891 104 2e-17 seq10171 87.8 2e-12 >seq1891 Length=13189 Score = 104 bits (114), Expect = 2e-17 Identities = 173/244 (71%), Gaps = 11/244 (5%) Strand=Plus/Plus Query 94773 TTTACA---CTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGT 94829 |||||| ||||||| | || || | |||||| || | || || ||||| || | || Sbjct 7882 TTTACAAGGCTCCTCCACGCAGACGAAGCACCAAATGGAGTGTGGACTCCTTCTGGATGT 7941 Query 94830 TATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 | || || | | || ||| | ||||| | ||| || ||| |||| || |||| || Sbjct 7942 TGTAGTC--TGAAAGAGTTCGGCCGTCCTCTAACTGCTTACCGGCAAAAATCAATCGCTG 7999 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 || ||||| ||||| ||||| ||||| | || || || |||||| ||| |||||| Sbjct 8000 TTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTGGCTTTGACGTTTTCGATAGTGTC 8059 Query 94948 AGCGTGG--TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 || ||| || || || | |||||||| || || || ||||| || || ||||||||| Sbjct 8060 -GC-TGGCTTCCACTTCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTTACGAAGATCTGC 8117 Query 95006 ATGC 95009 |||| Sbjct 8118 ATGC 8121 >seq10171 Length=5186 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 94872 CAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGA 94931 ||||||| |||| ||||||||||| ||||| || || ||||| | ||| || ||||||| Sbjct 632 CAAAGATCAATCGCTGCTGATCTGGCGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGA 573 Query 94932 CGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTT 94991 || ||| ||||||| || || || | ||| || || || ||||| || || | Sbjct 572 CGTTCTCGATGGTGTCAGACGCCTCCACTTCGAGCGTAATTGTCTTGCCAGTCAGTGTCT 513 Query 94992 TCACAAAGATCTGCAT 95007 | |||||||| ||||| Sbjct 512 TGACAAAGATTTGCAT 497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448207089363600