Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq8124 98.7 9e-16 seq14890 86.0 5e-12 seq10171 86.0 5e-12 >seq8124 Length=14328 Score = 98.7 bits (108), Expect = 9e-16 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| || ||||| ||||| || | ||||| ||||||| ||||| Sbjct 8513 AATGCAAATCTTTGTCAAGACATTGACTGGCAAGACAATTACGCTCGAAGTGGAGGCGTC 8572 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| ||| | ||||| |||||| ||||| || ||||| ||||| || || Sbjct 8573 TGACACCATTGAGAATGTCAAGGCTAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCA 8632 Query 24110 ACAGAGACTGATTTACG 24126 ||||||||||||| || Sbjct 8633 GCAGAGACTGATTTTCG 8649 >seq14890 Length=108563 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 23989 AAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCA 24048 |||||||| | ||||| |||||||| || || || |||| || | ||||||||||| Sbjct 69601 AAATGCAAATCTTTGTCAAAACATTGACGGGCAAGACGATCACGTTGGAAGTCGAGGCTT 69660 Query 24049 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATC 24108 ||||| |||||| | || || |||||| ||||| ||||| || || || |||| Sbjct 69661 CGGACACAATCGAGAATGTGAAGGCTAAGATTCAGGACAAGGAAGGAATTCCACCAGATC 69720 Query 24109 AACAGAGACTGATTT 24123 | ||| |||| |||| Sbjct 69721 AGCAGCGACTCATTT 69735 >seq10171 Length=5186 Score = 86.0 bits (94), Expect = 5e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| || ||| | ||||| || | ||||| ||||||| ||||| Sbjct 496 AATGCAAATCTTTGTCAAGACACTGACTGGCAAGACAATTACGCTCGAAGTGGAGGCGTC 555 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||||||| | ||||| |||||| ||||| || ||||| || || ||||| Sbjct 556 TGACACCATCGAGAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCGCCAGATCA 615 Query 24110 ACAGAGACTGAT 24121 ||| || |||| Sbjct 616 GCAGCGATTGAT 627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429857349926550