Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02]
15,010 sequences; 90,131,014 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq11478 111 1e-19
seq9799 109 4e-19
seq2663 107 1e-18
>seq11478
Length=5940
Score = 111 bits (122), Expect = 1e-19
Identities = 75/84 (89%), Gaps = 5/84 (6%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 5720 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 5661
Query 25957 TAATCCTTTCATGCGCGTCACTAA 25980
|||||| |||||||||| | ||||
Sbjct 5660 TAATCCATTCATGCGCGCCCCTAA 5637
>seq9799
Length=3475
Score = 109 bits (120), Expect = 4e-19
Identities = 74/83 (89%), Gaps = 5/83 (6%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 3256 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 3197
Query 25957 TAATCCTTTCATGCGCGTCACTA 25979
|||||| |||||||||| | |||
Sbjct 3196 TAATCCATTCATGCGCGCCCCTA 3174
>seq2663
Length=10768
Score = 107 bits (118), Expect = 1e-18
Identities = 74/84 (88%), Gaps = 5/84 (6%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||| |||||||||||||||||||||||||||||||| || ||||||||
Sbjct 7844 AAGCCCGTTCCTTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 7903
Query 25957 TAATCCTTTCATGCGCGTCACTAA 25980
|||||| |||||||||| | ||||
Sbjct 7904 TAATCCATTCATGCGCGCCCCTAA 7927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334885926643310
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |