Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1891 105 6e-18 >seq1891 Length=13189 Score = 105 bits (116), Expect = 6e-18 Identities = 170/243 (70%), Gaps = 1/243 (0%) Strand=Plus/Plus Query 114142 ACCATTTACAAATA-CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGA 114200 ||||||||||| || ||||| || | | || ||||| | || || || || || Sbjct 7878 ACCATTTACAAGGCTCCTCCACGCAGACGAAGCACCAAATGGAGTGTGGACTCCTTCTGG 7937 Query 114201 ATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGC 114260 |||||||| || | ||| || || || | || ||||| || | || | ||| Sbjct 7938 ATGTTGTAGTCTGAAAGAGTTCGGCCGTCCTCTAACTGCTTACCGGCAAAAATCAATCGC 7997 Query 114261 TGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTG 114320 |||||||| || ||||||||||| ||||| ||||| ||| | | ||| | ||| Sbjct 7998 TGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTGGCTTTGACGTTTTCGATAGTG 8057 Query 114321 TCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGC 114380 ||| ||| ||| || |||| ||| | || |||||||| ||||| ||||| || |||||| Sbjct 8058 TCGCTGGCTTCCACTTCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTTACGAAGATCTGC 8117 Query 114381 ATG 114383 ||| Sbjct 8118 ATG 8120 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | || | ||| | || || || || || |||||||| || Sbjct 9218 ATGCCTCCACGCAGACGAAGCACCAGATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCC 9277 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || || || | || ||||| || | || | ||||||||||| || Sbjct 9278 GAAAGAGTTCGGCCGTCCTCCAACTGCTTACCGGCAAAAATCAATCGCTGTTGGTCTGGG 9337 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| ||||| ||| | | ||| | |||||| ||| ||| Sbjct 9338 GGAATGCCTTCCTTGTCTTGGATCTTGGCTTTGACGTTTTCGATAGTGTCGCTGGCTTCC 9397 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || |||||||| ||||| |||||||| || ||||| Sbjct 9398 ACTTCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTTACAAAGATTTGCAT 9447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420057542976120