Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq1891 118 8e-22 >seq1891 Length=13189 Score = 118 bits (130), Expect = 8e-22 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| || || || || || || |||||||| || ||| ||| |||| || || || Sbjct 9244 ATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTTCGGCCGTCCTCCAACTG 9303 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || || || | ||||| ||||||||||| ||||| ||||||||||| || || Sbjct 9304 CTTACCGGCAAAAATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTT 9363 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | ||| || |||| ||||| ||||| ||| || || ||||| ||||| || || || Sbjct 9364 GGCTTTGACGTTTTCGATAGTGTCGCTGGCTTCCACTTCCAAGGTGATGGTCTTGCCGGT 9423 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 ||||| |||||||| ||||||||| Sbjct 9424 GAGAGTCTTTACAAAGATTTGCATA 9448 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || ||||| || || || || || || |||||||| || ||| ||| |||| ||| Sbjct 7911 ACCAAATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCTGAAAGAGTTCGGCCGTCCTCT 7970 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 || || || || || | ||||| ||||||||||| ||||| ||||||||||| Sbjct 7971 AACTGCTTACCGGCAAAAATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGG 8030 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || ||| ||| || |||| ||||| ||||| ||| || || ||||| ||||| || Sbjct 8031 ATCTTGGCTTTGACGTTTTCGATAGTGTCGCTGGCTTCCACTTCCAAGGTGATGGTCTTG 8090 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || ||||| ||||| || || ||||| Sbjct 8091 CCGGTGAGAGTCTTTACGAAGATCTGCAT 8119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357326620717850