Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq14124 109 2e-18 seq13412 109 2e-18 seq7948 104 9e-17 seq7315 100 1e-15 seq11196 93.3 2e-13 seq8173 93.3 2e-13 seq14918 86.0 2e-11 seq8124 86.0 2e-11 >seq14124 Length=51435 Score = 109 bits (120), Expect = 2e-18 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 451312 AGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371 ||||| |||| || | |||||||| ||||||||||||||||| || || || ||||| Sbjct 30114 AGTTAAGAATGCCGTTGTGACTGTTCCTGCTTATTTCAATGATGCTCAGCGACAGGCAAC 30173 Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431 || || |||||| || ||||||||||||||| ||||||| ||||| || || || || Sbjct 30174 CAAGGACGCAGGAACGATCGCTGGTTTAAATGTTGTTCGAATAATTAACGAGCCGACTGC 30233 Query 451432 AGCTGCTCTAGCATATGG 451449 || || | || ||||| Sbjct 30234 TGCCGCCATTGCTTATGG 30251 >seq13412 Length=3115 Score = 109 bits (120), Expect = 2e-18 Identities = 174/246 (71%), Gaps = 8/246 (3%) Strand=Plus/Minus Query 451892 ATTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTG 451951 ||| | ||||| || ||||| || |||||||| || ||||| ||| |||| | || | Sbjct 577 ATTCACGAAATCGTTCTTGTCGGTGGTTCTACTCGTATTCCGAAAGTTCAGAAGTTGCTC 518 Query 451952 TCTT-CTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGC 452010 || ||| |||| | || || |||| |||||| | || || ||||||||||| || Sbjct 517 TCGGACTTCTTTTCG-GGCAAGGAACTCAATAAGAGTATCAACCCGGATGAAGCTGTCGC 459 Query 452011 ATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAAAAATTAGG 452067 |||||| |||||||||||||| |||||||| ||||| ||| | |||| | Sbjct 458 ATATGGCGCTGCAGTTCAAGCCGCTATTCTCTCAGGT---GATAAATCTGAAGCTGTGCA 402 Query 452068 AGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAAT 452127 || |||| || | ||||| | ||| | || || ||| |||| || ||||| || | Sbjct 401 GGACCTTCTCTTGTTGGATGTTGCGCCTTTGTCACTGGGAATTGAGACTGCTGGAGGTGT 342 Query 452128 GATGAC 452133 |||||| Sbjct 341 GATGAC 336 >seq7948 Length=6013 Score = 104 bits (114), Expect = 9e-17 Identities = 173/246 (70%), Gaps = 8/246 (3%) Strand=Plus/Minus Query 451892 ATTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTG 451951 ||| | ||||| || ||||| || ||||| || || ||||| ||| |||| | || | Sbjct 5503 ATTCACGAAATCGTTCTTGTCGGTGGTTCCACTCGTATTCCGAAAGTTCAGAAGTTGCTC 5444 Query 451952 TCTT-CTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGC 452010 || ||| |||| | || || |||| |||||| | || || ||||||||||| || Sbjct 5443 TCGGACTTCTTTTCG-GGCAAGGAACTCAATAAGAGTATCAACCCGGATGAAGCTGTCGC 5385 Query 452011 ATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAAAAATTAGG 452067 |||||| |||||||||||||| |||||||| ||||| ||| | |||| | Sbjct 5384 ATATGGCGCTGCAGTTCAAGCCGCTATTCTCTCAGGT---GATAAATCTGAAGCTGTGCA 5328 Query 452068 AGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAAT 452127 || |||| || | ||||| | ||| | || || ||| |||| || ||||| || | Sbjct 5327 GGACCTTCTCTTGTTGGATGTTGCGCCTTTGTCACTGGGAATTGAGACTGCTGGAGGTGT 5268 Query 452128 GATGAC 452133 |||||| Sbjct 5267 GATGAC 5262 >seq7315 Length=2336 Score = 100 bits (110), Expect = 1e-15 Identities = 118/157 (75%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 451892 ATTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTG 451951 ||| | ||||| || ||||| || |||||||| || || || ||| |||| | || | Sbjct 1126 ATTCACGAAATCGTTCTTGTCGGTGGTTCTACTCGTATCCCGAAAGTTCAGAAGTTGCTC 1067 Query 451952 TCTT-CTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGC 452010 || ||| |||| | || || |||| |||||| | || || ||||||||||| || Sbjct 1066 TCGGACTTCTTTTCG-GGCAAGGAACTCAATAAGAGTATCAACCCGGATGAAGCTGTCGC 1008 Query 452011 ATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGT 452047 |||||| |||||||||||||| |||||||| ||||| Sbjct 1007 ATATGGCGCTGCAGTTCAAGCCGCTATTCTCTCAGGT 971 >seq11196 Length=68467 Score = 93.3 bits (102), Expect = 2e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 451312 AGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371 ||||| |||| || | || || |||||||||||||||||||| || || || ||||| Sbjct 41783 AGTTAAGAATGCTGTTGTAACCGTCCCCGCTTATTTCAATGATGCTCAGCGACAGGCAAC 41842 Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431 || || || ||| || || |||||||||||| | |||| || || || || ||||| Sbjct 41843 CAAGGACGCTGGAACAATCGCCGGTTTAAATGTTGTGAGAATCATCAACGAGCCCACAGC 41902 Query 451432 AGCTGCTCTAGCATATGGACT 451452 || ||| | || ||||| || Sbjct 41903 TGCCGCTATTGCTTATGGTCT 41923 >seq8173 Length=2379 Score = 93.3 bits (102), Expect = 2e-13 Identities = 183/268 (68%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 451867 TGATTCTAAAATTAGTAAAGATAAAATTGATGAAATTGTGCTTGTAGGAGGTTCTACACG 451926 |||| | ||||| | ||| ||||| ||||||| || ||||| || |||||||| || Sbjct 314 TGATGCCAAAATGAATAAGTCGGAAATTCATGAAATCGTTCTTGTCGGTGGTTCTACTCG 373 Query 451927 AATTCCTAAAATTCAAGATATGTTGTCTT-CTTATTTTGGAGGAAAACAACTATGTAAGA 451985 || || || |||| | || | || ||| || | | || || |||| ||||| Sbjct 374 TATCCCGAAGGTTCAGAAGTTGCTCTCGGACTTCTTCTCG-GGCAAGGAACTCAATAAGA 432 Query 451986 GCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAG 452045 | || | ||||||||||| |||||||| |||||||||||||| ||||||| ||| Sbjct 433 GTACCAACGCGGATGAAGCTGTCGCATATGGCGCTGCAGTTCAAGCCACTATTCTCTCAG 492 Query 452046 GTTCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTG 452105 || | || | | | || ||||||| | ||||| | ||| | || || | Sbjct 493 GTAATAAATCTGGAGCTGTGGAGGACCTTCTGTTGTTGGATGTTGCCCCTTTGTCACTGG 552 Query 452106 GAGTTGAAACAGCTGGTGGAATGATGAC 452133 || |||| || ||||| || ||||||| Sbjct 553 GAATTGAGACTGCTGGAGGTGTGATGAC 580 >seq14918 Length=33047 Score = 86.0 bits (94), Expect = 2e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || |||||||| ||||||||||| ||||| ||||| || || || || | || Sbjct 399 AATGCAGATCTTCGTTAAGACACTGACTGGCAAAACAATTACGCTCGAAGTGGAGGCGTC 458 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | ||| ||| | | || ||||| |||||||| ||||| ||||| || || || Sbjct 459 TGACACCATCGAAAATGTGAAGGCTAAAATCCAAGATAAAGAAGGCATTCCGCCGGACCA 518 Query 391169 ACAACGTTTAATTTT 391183 || || || || || Sbjct 519 GCAGCGATTGATCTT 533 >seq8124 Length=14328 Score = 86.0 bits (94), Expect = 2e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || |||||||| ||||||||||| ||||| ||||| || || || || | || Sbjct 8917 AATGTAGATCTTCGTTAAGACACTGACTGGCAAAACAATTACGCTCGAAGTGGAGGCGTC 8976 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | ||| ||| | | || ||||| |||||||| ||||| ||||| || || || Sbjct 8977 TGACACCATCGAAAATGTGAAGGCTAAAATCCAAGATAAAGAAGGCATTCCGCCGGACCA 9036 Query 391169 ACAACGTTTAATTTT 391183 || || || || || Sbjct 9037 GCAGCGATTGATCTT 9051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975338438481080