Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1685 132 5e-26 >seq1685 Length=49379 Score = 132 bits (146), Expect = 5e-26 Identities = 155/204 (76%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 48135 TCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCA 48194 |||||| ||| || ||| | |||||||| |||| |||||||||||||||||| | | Sbjct 5827 TCCCCA-ACA-ATCATCCAGACCAGGACAATCATGAGGACACATCAATGACCACATTTGA 5770 Query 48195 TCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAA-TAAATCCCT 48253 ||| | | |||||| ||||||| | ||| || ||||| | | | ||||| |||||| || Sbjct 5769 TCAGTCTCTACTCTTTTCATAAAAAGATCGGGAATCCACA-ATCCATAAAATAAATCTCT 5711 Query 48254 AGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGC 48313 || || |||||| ||| ||||| |||| || |||||||| ||||| ||||| || Sbjct 5710 AGCTCGGTCTTCTTCTGACCCAATATTCTTTTTGAGCTCAAGAAAATCCATAATATCTGC 5651 Query 48314 ATGCCATGGTTCTAAATATATTGC 48337 ||||||||| || || || || || Sbjct 5650 ATGCCATGGCTCCAAGTAGATAGC 5627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562003334336400