Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1891 138 9e-28 seq14918 122 7e-23 seq8124 118 8e-22 seq8372 107 2e-18 seq10171 95.1 1e-14 >seq1891 Length=13189 Score = 138 bits (152), Expect = 9e-28 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101242 TCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGC 101301 |||||| | | ||| | || ||||| || || || || || || || ||||| || | Sbjct 7892 TCCTCCACGCAGACGAAGCACCAAATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCTGA 7951 Query 101302 GATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGG 101361 | ||||| | | || || || |||||||| ||||| ||||| |||||||| || || || Sbjct 7952 AAGAGTTCGGCCGTCCTCTAACTGCTTACCGGCAAAAATCAATCGCTGTTGGTCTGGGGG 8011 Query 101362 AATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCAC 101421 ||||||||| || ||||| || || ||| || |||| | |||||| | |||||| Sbjct 8012 AATGCCTTCCTTGTCTTGGATCTTGGCTTTGACGTTTTCGATAGTGTCGCTGGCTTCCAC 8071 Query 101422 TTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||| | |||| || |||||||| | ||| ||||| || ||||||||| Sbjct 8072 TTCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTTACGAAGATCTGCATG 8120 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | | ||| | || | ||| || || || || || || || ||||| || | Sbjct 9221 CCTCCACGCAGACGAAGCACCAGATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAA 9280 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | | || ||||| |||||||| ||||| ||||| |||||||| || || ||| Sbjct 9281 AGAGTTCGGCCGTCCTCCAACTGCTTACCGGCAAAAATCAATCGCTGTTGGTCTGGGGGA 9340 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || ||||| || || ||| || |||| | |||||| | ||||||| Sbjct 9341 ATGCCTTCCTTGTCTTGGATCTTGGCTTTGACGTTTTCGATAGTGTCGCTGGCTTCCACT 9400 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | |||| || |||||||| | ||| |||||||| || ||||| Sbjct 9401 TCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTTACAAAGATTTGCAT 9447 >seq14918 Length=33047 Score = 122 bits (134), Expect = 7e-23 Identities = 114/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384 ||||||| ||||| ||||| ||||| || || ||||||||||||||||||||||| |||| Sbjct 544 GCTTACCAGCAAAGATCAATCGCTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGGATTT 485 Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444 | || ||| |||| | |||||||||| |||||||| || || | |||||||| | Sbjct 484 TAGCCTTCACATTTTCGATGGTGTCAGACGCCTCCACTTCGAGCGTAATTGTTTTGCCAG 425 Query 101445 TTAAAGTTTTTACAAATATCTGCAT 101469 | | || || || || |||||||| Sbjct 424 TCAGTGTCTTAACGAAGATCTGCAT 400 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387 ||||||| || ||||| ||||| || || ||||||||||| || || || ||||| || Sbjct 137 TACCTGCGAAAATCAAGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGAATCTTAG 78 Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447 || || | || | |||||||||| |||||||| || || | || ||||| || | Sbjct 77 CCTTAACGTTCTCAATGGTGTCAGACGCCTCCACTTCGAGCGTAATTGTCTTGCCAGTCA 18 Query 101448 AAGTTTTTACAAATAT 101463 | || || ||||| || Sbjct 17 ATGTCTTGACAAAGAT 2 >seq8124 Length=14328 Score = 118 bits (130), Expect = 8e-22 Identities = 113/145 (78%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384 ||||||| ||||| ||||| ||||| || || ||||||||||||||||||||||| |||| Sbjct 9062 GCTTACCAGCAAAGATCAATCGCTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGGATTT 9003 Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444 | || ||| |||| | |||||||||| |||||||| || || | |||||||| | Sbjct 9002 TAGCCTTCACATTTTCGATGGTGTCAGACGCCTCCACTTCGAGCGTAATTGTTTTGCCAG 8943 Query 101445 TTAAAGTTTTTACAAATATCTGCAT 101469 | | || || || || |||| ||| Sbjct 8942 TCAGTGTCTTAACGAAGATCTACAT 8918 Score = 102 bits (112), Expect = 6e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 |||||| ||||| ||||||||||| ||||| || || || || || || || || || || Sbjct 8087 CTTACCAGCAAAGATCAAACGCTGCTGATCCGGTGGGATTCCCTCCTTGTCCTGGATCTT 8028 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||| ||| | || | ||||| |||| ||| ||||||||||||| ||| || || || Sbjct 8027 GGCTTTGACATTCTCGATTGTGTCCGACGCTTCGACTTCAAGAGTGATCGTCTTTCCCGT 7968 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || || || ||||| Sbjct 7967 CAAAGTCTTCACGAAAATTTGCAT 7944 >seq8372 Length=2112 Score = 107 bits (118), Expect = 2e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 |||||| ||||| ||||||||||| ||||| || || || || || || || || || || Sbjct 1415 CTTACCAGCAAAGATCAAACGCTGCTGATCCGGTGGGATTCCCTCCTTGTCCTGGATCTT 1356 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||| ||| | || | ||||| |||| ||| ||||||||||||| ||| || || || Sbjct 1355 GGCTTTGACATTCTCGATTGTGTCCGACGCTTCGACTTCAAGAGTGATCGTCTTTCCCGT 1296 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 |||||| || || || || ||||| Sbjct 1295 TAAAGTCTTCACGAAAATTTGCAT 1272 >seq10171 Length=5186 Score = 95.1 bits (104), Expect = 1e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 101325 GCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTT 101384 ||||||| ||||| ||||| ||||| ||||| ||||||||||| || || || ||||| | Sbjct 641 GCTTACCAGCAAAGATCAATCGCTGCTGATCTGGCGGAATGCCCTCCTTGTCCTGAATCT 582 Query 101385 TTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGG 101444 | || || | || | |||||||||| |||||||| || || | || ||||| | Sbjct 581 TGGCCTTGACGTTCTCGATGGTGTCAGACGCCTCCACTTCGAGCGTAATTGTCTTGCCAG 522 Query 101445 TTAAAGTTTTTACAAATATCTGCAT 101469 | | || || ||||| || ||||| Sbjct 521 TCAGTGTCTTGACAAAGATTTGCAT 497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396205907058570