Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1672 87.8 2e-12 seq9711 84.2 3e-11 >seq1672 Length=39445 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331 ||||| || |||| || | ||| || || || |||| ||||| || ||||||||| Sbjct 908 CCATGGTAAACTGCGTACATGGCAGCAATGTTGGCTGGCAGGGCTTGAGCCGTGCAGATG 967 Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391 ||| ||| |||||||||| | |||||| || || | |||||| || ||||||||||| Sbjct 968 TTAGAGGTGGCTTTGTCTCGCCGAATATGTTGTTCACGAGTTTGCAGAGCTAATCTGTAG 1027 Query 139392 GCAGGATTGCC 139402 || |||| || Sbjct 1028 GCTCGATTTCC 1038 >seq9711 Length=19112 Score = 84.2 bits (92), Expect = 3e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || |||||||| || | ||||| || || || ||||| |||||||| || ||||| || Sbjct 16342 ACTCCAATAGGGCCAGCACCAGGTCCACCTCCACCATGAGGAATACAAAAGGTCTTGTGC 16401 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCAC 138276 || ||||| ||| | ||||||| ||||||||||| Sbjct 16402 AAGTTTAGGTGAGAGACATCTGAACCATAGTCAC 16435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578889765425200