Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq1891 105 1e-17 seq14918 84.2 4e-11 >seq1891 Length=13189 Score = 105 bits (116), Expect = 1e-17 Identities = 165/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || || || | || ||||| |||||||| | ||| | ||| || || || Sbjct 9212 ATTTGCATGCCTCCACGCAGACGAAGCACCAGATGGAGTGTGGACTCCTTCTGGATGTTG 9271 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || | |||| || || || || || ||||||||||| |||| |||||| Sbjct 9272 TAGTCCGAAAGAGTTCGGCCGTCCTCCAACTGCTTACCGGCAAAAATCAATCGCTGTTGG 9331 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || ||||| || ||||| || |||| ||| | ||| ||||| ||| Sbjct 9332 TCTGGGGGAATGCCTTCCTTGTCTTGGATCTTGGCTTTGACGTTTTCGATAGTGTCGCTG 9391 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | || ||||| | || || || || || || || || |||||||| |||||||| Sbjct 9392 GCTTCCACTTCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTTACAAAGATTTGCAT 9447 Score = 95.1 bits (104), Expect = 2e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| |||| ||| | ||| | ||| || || || ||||| || | |||| Sbjct 7905 CGAAGCACCAAATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCTGAAAGAGTTCGGCCG 7964 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || ||||| || || ||||||||||| |||| |||||| || || || || ||||| || Sbjct 7965 TCCTCTAACTGCTTACCGGCAAAAATCAATCGCTGTTGGTCTGGGGGAATGCCTTCCTTG 8024 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || |||| ||| | ||| ||||| ||| | || ||||| | || || Sbjct 8025 TCTTGGATCTTGGCTTTGACGTTTTCGATAGTGTCGCTGGCTTCCACTTCCAAGGTGATG 8084 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || ||||| || || ||||| Sbjct 8085 GTCTTGCCGGTGAGAGTCTTTACGAAGATCTGCAT 8119 >seq14918 Length=33047 Score = 84.2 bits (92), Expect = 4e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 193218 TTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTG 193277 || || ||||| || |||| ||| || || || || || |||||||||||||| ||||| Sbjct 542 TTACCAGCAAAGATCAATCGCTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGGATTTTA 483 Query 193278 GTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTT 193337 | || | |||| || || || || | ||| ||||| || || || ||||| || || Sbjct 482 GCCTTCACATTTTCGATGGTGTCAGACGCCTCCACTTCGAGCGTAATTGTTTTGCCAGTC 423 Query 193338 AGCGTTTTTACAAATATTTGCATT 193361 || || || || || || |||||| Sbjct 422 AGTGTCTTAACGAAGATCTGCATT 399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899485602343200