Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq14918 102 1e-16 seq8124 96.9 5e-15 seq1891 95.1 2e-14 >seq14918 Length=33047 Score = 102 bits (112), Expect = 1e-16 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || || |||| ||| ||||||| ||||| ||||| | ||||| || | || Sbjct 399 AATGCAGATCTTCGTTAAGACACTGACTGGCAAAACAATTACGCTCGAAGTGGAGGCGTC 458 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| | || ||| ||||| |||||| ||||||||||||||||| || || || || Sbjct 459 TGACACCATCGAAAATGTGAAGGCTAAAATCCAAGATAAAGAAGGCATTCCGCCGGACCA 518 Query 155942 ACAAAGATTGATTTATGCCGGTAAGC 155967 || ||||||| | ||| ||||||| Sbjct 519 GCAGCGATTGATCTTTGCTGGTAAGC 544 >seq8124 Length=14328 Score = 96.9 bits (106), Expect = 5e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||| | || || |||| ||| ||||||| ||||| ||||| | ||||| || | || Sbjct 8917 AATGTAGATCTTCGTTAAGACACTGACTGGCAAAACAATTACGCTCGAAGTGGAGGCGTC 8976 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| | || ||| ||||| |||||| ||||||||||||||||| || || || || Sbjct 8977 TGACACCATCGAAAATGTGAAGGCTAAAATCCAAGATAAAGAAGGCATTCCGCCGGACCA 9036 Query 155942 ACAAAGATTGATTTATGCCGGTAAGC 155967 || ||||||| | ||| ||||||| Sbjct 9037 GCAGCGATTGATCTTTGCTGGTAAGC 9062 >seq1891 Length=13189 Score = 95.1 bits (104), Expect = 2e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || | || || || || || || || ||||| |||| Sbjct 8119 ATGCAGATCTTCGTAAAGACTCTCACCGGCAAGACCATCACCTTGGAAGTGGAAGCCAGC 8060 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| |||||| ||| || || ||||| || |||||||| || ||||| ||| Sbjct 8059 GACACTATCGAAAACGTCAAAGCCAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAA 8000 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||||||||| ||||||||||||| | || || | ||||| | ||||| || || Sbjct 7999 CAGCGATTGATTTTTGCCGGTAAGCAGTTAGAGGACGGCCGAACTCTTTCAGACTACAAC 7940 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTG 156032 || || ||| | || || ||||| ||| Sbjct 7939 ATCCAGAAGGAGTCCACACTCCATTTGGTG 7910 Score = 95.1 bits (104), Expect = 2e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || | || || || || || || || ||||| |||| Sbjct 9447 ATGCAAATCTTTGTAAAGACTCTCACCGGCAAGACCATCACCTTGGAAGTGGAAGCCAGC 9388 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| |||||| ||| || || ||||| || |||||||| || ||||| ||| Sbjct 9387 GACACTATCGAAAACGTCAAAGCCAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAA 9328 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || ||||||||| ||||||||||||| | || || | ||||| | || || || || Sbjct 9327 CAGCGATTGATTTTTGCCGGTAAGCAGTTGGAGGACGGCCGAACTCTTTCGGACTACAAC 9268 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTG 156032 || || ||| | || || ||| | ||| Sbjct 9267 ATCCAGAAGGAGTCCACACTCCATCTGGTG 9238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731734682516000