Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq13124 96.9 3e-15 seq7008 82.4 6e-11 seq6996 82.4 6e-11 seq4379 82.4 6e-11 >seq13124 Length=15883 Score = 96.9 bits (106), Expect = 3e-15 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 34495 GGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTG 34554 ||||| |||| ||||||||||| || | ||||||| | ||||| |||||||| || || Sbjct 5349 GGACGAGCAAGAGCCTTGGCGATGTCAGTCATGTTGGCAATGACCGTCTTGATTCCATTT 5408 Query 34555 CCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAG 34602 || || || || |||||||| | || |||||||| |||||||| ||| Sbjct 5409 CCTTTGCCCTCCACCTTGGCTAATATACGCGGCATCTTGTAGCGATAG 5456 >seq7008 Length=8068 Score = 82.4 bits (90), Expect = 6e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 34494 CGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTT 34553 |||||| |||| ||||||||||| || | ||||||| | || || || ||||| || || Sbjct 6971 CGGACGAGCAAGAGCCTTGGCGATCTCAGTCATGTTGGCAATAACCGTTTTGATTCCATT 6912 Query 34554 GCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTA 34601 || || ||||| || ||||| | || |||||||| || ||||| || Sbjct 6911 CCCTTTCCCTTCCACTTTGGCCAAAATACGCGGCATCTTATAGCGATA 6864 >seq6996 Length=12695 Score = 82.4 bits (90), Expect = 6e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 34494 CGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTT 34553 |||||| |||| ||||||||||| || | ||||||| | || || || ||||| || || Sbjct 12257 CGGACGAGCAAGAGCCTTGGCGATCTCAGTCATGTTGGCAATAACCGTTTTGATTCCATT 12316 Query 34554 GCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTA 34601 || || ||||| || ||||| | || |||||||| || ||||| || Sbjct 12317 CCCTTTCCCTTCCACTTTGGCCAAAATACGCGGCATCTTATAGCGATA 12364 >seq4379 Length=1843 Score = 82.4 bits (90), Expect = 6e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 34494 CGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTT 34553 |||||| |||| ||||||||||| || | ||||||| | || || || ||||| || || Sbjct 1098 CGGACGAGCAAGAGCCTTGGCGATCTCAGTCATGTTGGCAATAACCGTTTTGATTCCATT 1157 Query 34554 GCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTA 34601 || || ||||| || ||||| | || |||||||| || ||||| || Sbjct 1158 CCCTTTCCCTTCCACTTTGGCCAAAATACGCGGCATCTTATAGCGATA 1205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412766077079930