Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq1891 109 4e-19 >seq1891 Length=13189 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| ||||| || ||| | || ||||| ||||| ||| | ||| ||| || || Sbjct 9447 ATGCAAATCTTTGTAAAGACTCTCACCGGCAAGACCATCACCTTGGAAGTGGAAGCCAGC 9388 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| ||| | || ||| ||||| || || |||||| | ||| || || Sbjct 9387 GACACTATCGAAAACGTCAAAGCCAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAA 9328 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| || | |||| ||| ||||| ||| ||||||||| | ||| | ||||||||||| Sbjct 9327 CAGCGATTGATTTTTGCCGGTAAGCAGTTGGAGGACGGCCGAACTCTTTCGGACTACAAC 9268 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| || | || ||||| Sbjct 9267 ATCCAGAAGGAGTCCACACTCCATCTGGTG 9238 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || || ||| | || ||||| ||||| ||| | ||| ||| || || Sbjct 8119 ATGCAGATCTTCGTAAAGACTCTCACCGGCAAGACCATCACCTTGGAAGTGGAAGCCAGC 8060 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| ||| | || ||| ||||| || || |||||| | ||| || || Sbjct 8059 GACACTATCGAAAACGTCAAAGCCAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAA 8000 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| || | |||| ||| ||||| ||| | ||||||| | ||| | | ||||||||| Sbjct 7999 CAGCGATTGATTTTTGCCGGTAAGCAGTTAGAGGACGGCCGAACTCTTTCAGACTACAAC 7940 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGA 107783 || || |||||||| || | || ||||| | | |||| || ||| Sbjct 7939 ATCCAGAAGGAGTCCACACTCCATTTGGTGCTTCGTCTGCGTGGAGGA 7892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398803831721890