Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1891 95.1 3e-14 seq10171 86.0 1e-11 >seq1891 Length=13189 Score = 95.1 bits (104), Expect = 3e-14 Identities = 144/201 (72%), Gaps = 3/201 (1%) Strand=Plus/Minus Query 206180 TTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTC 206238 |||| ||| || ||||| || || || ||||| |||||||||||| ||||| || Sbjct 9438 TTTGTAAAGACTCTCACCGGCAAGACCATCACCTTGGAAGTGGAAGCCAGCGACACTATC 9379 Query 206239 GAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 ||| || ||||| || ||| ||||| || ||||| ||| || ||| || || | Sbjct 9378 GAAAACGTCAAAGCCAA-GATCCAAGACAAGGAAGGCATTCCCCCAGACCAACAGCGATT 9320 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 || || ||||| ||||||||||| || || | ||| | | || |||||| ||||||| Sbjct 9319 GATTTTTGCCGGTAAGCAGTTGGAGGACGGCCGAACTCTTTCGGACTACAACATCCAGAA 9260 Query 206358 AGAGTCTACTCTTCACCTTGT 206378 ||||| || || || || || Sbjct 9259 GGAGTCCACACTCCATCTGGT 9239 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || ||||| |||||||||||| ||||| ||||| Sbjct 8104 AAGACTCTCACCGGCAAGACCATCACCTTGGAAGTGGAAGCCAGCGACACTATCGAAAAC 8045 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||||| ||||| || ||||| ||| || ||| || || | || || Sbjct 8044 GTCAAAGC-CAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAACAGCGATTGATTTT 7986 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||| |||||||| || || || | ||| | | || |||||| ||||||| ||||| Sbjct 7985 TGCCGGTAAGCAGTTAGAGGACGGCCGAACTCTTTCAGACTACAACATCCAGAAGGAGTC 7926 Query 206364 TACTCTTCA 206372 || || || Sbjct 7925 CACACTCCA 7917 >seq10171 Length=5186 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 204760 CAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATC 204819 ||| ||||||||||| |||||||||||||||| ||| ||||||| |||||| | ||||| Sbjct 481 CAAGACAAGGTGAAGCGTAGACTCTTTCTGGATATTGTAGTCAGACAAAGTTCGACCATC 422 Query 204820 TTCCAGCTGCTTTCC 204834 || |||||||| || Sbjct 421 CTCAAGCTGCTTCCC 407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181593517394210