Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq14179 80.6 8e-12 seq13728 78.8 3e-11 seq12810 78.8 3e-11 seq8922 78.8 3e-11 seq8589 78.8 3e-11 seq6815 78.8 3e-11 seq517 78.8 3e-11 >seq14179 Length=31560 Score = 80.6 bits (88), Expect = 8e-12 Identities = 63/74 (85%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 2759 TGTGTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCC 2818 ||| | | ||||| || |||||||||||||||||| |||||||||||||||||| ||| | Sbjct 25149 TGTCTGTGTGGCTCAA-TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCAC 25091 Query 2819 TGGTTCAACCCCGG 2832 ||||| | ||||| Sbjct 25090 CGGTTCGATCCCGG 25077 >seq13728 Length=20689 Score = 78.8 bits (86), Expect = 3e-11 Identities = 57/65 (88%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||| || |||||||||||||||||| |||||||||||||||||| ||| | ||||| | Sbjct 13965 GGCTCAA-TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCACCGGTTCGAT 14023 Query 2828 CCCGG 2832 ||||| Sbjct 14024 CCCGG 14028 >seq12810 Length=4534 Score = 78.8 bits (86), Expect = 3e-11 Identities = 57/65 (88%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||| || |||||||||||||||||| |||||||||||||||||| ||| | ||||| | Sbjct 3344 GGCTCAA-TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCACCGGTTCGAT 3286 Query 2828 CCCGG 2832 ||||| Sbjct 3285 CCCGG 3281 >seq8922 Length=8546 Score = 78.8 bits (86), Expect = 3e-11 Identities = 57/65 (88%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||| || |||||||||||||||||| |||||||||||||||||| ||| | ||||| | Sbjct 5166 GGCTCAA-TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCACCGGTTCGAT 5224 Query 2828 CCCGG 2832 ||||| Sbjct 5225 CCCGG 5229 >seq8589 Length=11446 Score = 78.8 bits (86), Expect = 3e-11 Identities = 57/65 (88%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||| || |||||||||||||||||| |||||||||||||||||| ||| | ||||| | Sbjct 5846 GGCTCAA-TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCACCGGTTCGAT 5788 Query 2828 CCCGG 2832 ||||| Sbjct 5787 CCCGG 5783 >seq6815 Length=2766 Score = 78.8 bits (86), Expect = 3e-11 Identities = 57/65 (88%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||| || |||||||||||||||||| |||||||||||||||||| ||| | ||||| | Sbjct 801 GGCTCAA-TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCACCGGTTCGAT 743 Query 2828 CCCGG 2832 ||||| Sbjct 742 CCCGG 738 >seq517 Length=5203 Score = 78.8 bits (86), Expect = 3e-11 Identities = 57/65 (88%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||| || |||||||||||||||||| |||||||||||||||||| ||| | ||||| | Sbjct 3917 GGCTCAA-TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAATGTCACCGGTTCGAT 3975 Query 2828 CCCGG 2832 ||||| Sbjct 3976 CCCGG 3980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15846997941450