Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1891 113 5e-20 seq8372 105 7e-18 seq14918 102 8e-17 seq8124 102 8e-17 seq10171 89.7 5e-13 >seq1891 Length=13189 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || || | ||| || || || ||||| ||||| || ||||||||||| | Sbjct 9221 CCTCCACGCAGACGAAGCACCAGATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAA 9280 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || | ||| || || ||||||||||| ||||| || || || || Sbjct 9281 AGAGTTCGGCCGTCCTCCAACTGCTTACCGGCAAAAATCAATCGCTGTTGGTCTGGGGGA 9340 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || ||||| || || |||||| || | |||||| | |||||| Sbjct 9341 ATGCCTTCCTTGTCTTGGATCTTGGCTTTGACGTTTTCGATAGTGTCGCTGGCTTCCACT 9400 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||| || ||||| | ||| || || || |||||||| Sbjct 9401 TCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTTACAAAGATTTGCAT 9447 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545 |||||| | || || | ||| | || || ||||| ||||| || ||||||||||| Sbjct 7892 TCCTCCACGCAGACGAAGCACCAAATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCTGA 7951 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || || | ||| || | ||| || || ||||||||||| ||||| || || || || Sbjct 7952 AAGAGTTCGGCCGTCCTCTAACTGCTTACCGGCAAAAATCAATCGCTGTTGGTCTGGGGG 8011 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 |||||||| || ||||| || || |||||| || | |||||| | |||||| Sbjct 8012 AATGCCTTCCTTGTCTTGGATCTTGGCTTTGACGTTTTCGATAGTGTCGCTGGCTTCCAC 8071 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||| || ||||| | ||| || ||||| || ||||| Sbjct 8072 TTCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTTACGAAGATCTGCAT 8119 >seq8372 Length=2112 Score = 105 bits (116), Expect = 7e-18 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| ||||||||||||||||| || || || || || || || || || || Sbjct 1414 TTACCAGCAAAGATCAAACGCTGCTGATCCGGTGGGATTCCCTCCTTGTCCTGGATCTTG 1355 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 |||||| || | |||||| |||| ||| || || ||||| || || || || ||| Sbjct 1354 GCTTTGACATTCTCGATTGTGTCCGACGCTTCGACTTCAAGAGTGATCGTCTTTCCCGTT 1295 Query 134691 AAAGTTTTAACGAAAATTTGCATTTT 134716 ||||| || |||||||||||||| || Sbjct 1294 AAAGTCTTCACGAAAATTTGCATATT 1269 >seq14918 Length=33047 Score = 102 bits (112), Expect = 8e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| ||||| |||||||| || ||||| ||||||||||| ||||| ||||| Sbjct 542 TTACCAGCAAAGATCAATCGCTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGGATTTTA 483 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 || || || | ||||| |||| ||||| ||||| ||||| ||||| || || Sbjct 482 GCCTTCACATTTTCGATGGTGTCAGACGCCTCCACTTCGAGCGTAATTGTTTTGCCAGTC 423 Query 134691 AAAGTTTTAACGAAAATTTGCATT 134714 | || |||||||| || |||||| Sbjct 422 AGTGTCTTAACGAAGATCTGCATT 399 >seq8124 Length=14328 Score = 102 bits (112), Expect = 8e-17 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| ||||||||||||||||| || || || || || || || || || || Sbjct 8086 TTACCAGCAAAGATCAAACGCTGCTGATCCGGTGGGATTCCCTCCTTGTCCTGGATCTTG 8027 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 |||||| || | |||||| |||| ||| || || ||||| || || || || || Sbjct 8026 GCTTTGACATTCTCGATTGTGTCCGACGCTTCGACTTCAAGAGTGATCGTCTTTCCCGTC 7967 Query 134691 AAAGTTTTAACGAAAATTTGCATTTT 134716 ||||| || |||||||||||||| || Sbjct 7966 AAAGTCTTCACGAAAATTTGCATATT 7941 Score = 98.7 bits (108), Expect = 1e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| ||||| |||||||| || ||||| ||||||||||| ||||| ||||| Sbjct 9060 TTACCAGCAAAGATCAATCGCTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGGATTTTA 9001 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 || || || | ||||| |||| ||||| ||||| ||||| ||||| || || Sbjct 9000 GCCTTCACATTTTCGATGGTGTCAGACGCCTCCACTTCGAGCGTAATTGTTTTGCCAGTC 8941 Query 134691 AAAGTTTTAACGAAAATTTGCATT 134714 | || |||||||| || | |||| Sbjct 8940 AGTGTCTTAACGAAGATCTACATT 8917 >seq10171 Length=5186 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| ||||| ||||||||||| ||||| ||||| || || || ||||| || Sbjct 639 TTACCAGCAAAGATCAATCGCTGCTGATCTGGCGGAATGCCCTCCTTGTCCTGAATCTTG 580 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||||| || | ||||| |||| ||||| ||||| ||||| || || || || Sbjct 579 GCCTTGACGTTCTCGATGGTGTCAGACGCCTCCACTTCGAGCGTAATTGTCTTGCCAGTC 520 Query 134691 AAAGTTTTAACGAAAATTTGCATT 134714 | || || || || ||||||||| Sbjct 519 AGTGTCTTGACAAAGATTTGCATT 496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505303574625200