Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1685 158 2e-33 seq7822 91.5 2e-13 >seq1685 Length=49379 Score = 158 bits (174), Expect = 2e-33 Identities = 163/211 (77%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACA 69566 ||| ||| | || || ||||||||||| |||||||| |||||||| |||| ||||| Sbjct 5848 ATAAAGCTGATCAAACACATCTCCCCAACAATCATCCAGACCAGGACAATCATGAGGACA 5789 Query 69567 CATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAG 69626 |||||||||||||| | |||| || |||| ||||||||| |||||||||||||| | Sbjct 5788 CATCAATGACCACATTTGATCAGTCTCTACTCTTTTCATAAAAAGATCGGGAATCCACA- 5730 Query 69627 AGCTATAAAG-AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGA 69685 | | ||||| | |||||| | || | |||||| || |||| ||||| || || | Sbjct 5729 ATCCATAAAATAAATCTCTAGCTCGGTCTTCTTCTGACCCAATATTCTTTTTGAGCTCAA 5670 Query 69686 GAAACTCCATAATATCAGAATGCCATGGTTC 69716 |||| ||||||||||| | ||||||||| || Sbjct 5669 GAAAATCCATAATATCTGCATGCCATGGCTC 5639 >seq7822 Length=21803 Score = 91.5 bits (100), Expect = 2e-13 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 68947 GATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAAT 69006 ||||| | ||| |||||||| || || || |||||| | ||| ||| || ||||| Sbjct 10666 GATCCTTCATAAGTTTCATATGGACCCGACTTTTCAGCCAATTCGCAAGACGCTTCTAAG 10607 Query 69007 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCG 69066 ||||||||||| ||||| |||||||| | |||||| | | |||||| ||| || Sbjct 10606 GCACCGTAATATATTGTCTCGAAAATTTGCTTATTCAAAAGACAAGCTTCTTCACTGTCA 10547 Query 69067 AATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAA 69109 ||||| || | | ||| || ||||||||||| |||| || Sbjct 10546 AATGGGTATCGCATAAGTTGGAACGCATCTGCCAAACCCTAAA 10504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686779918736400