Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1891 109 5e-19 seq7822 82.4 6e-11 >seq1891 Length=13189 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 ||||||| |||| || | |||| ||| | || || || || || || |||||||| Sbjct 9219 TGCCTCCACGCAGACGAAGCACCAGATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCCG 9278 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | | || |||| || | ||| |||||||| |||| | |||||||| || || | Sbjct 9279 AAAGAGTTCGGCCGTCCTCCAACTGCTTACCGGCAAAAATCAATCGCTGTTGGTCTGGGG 9338 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || ||||||| ||| | | |||| | |||||| ||||||| | Sbjct 9339 GAATGCCTTCCTTGTCTTGGATCTTGGCTTTGACGTTTTCGATAGTGTCGCTGGCTTCCA 9398 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||| | || || | ||||| || ||||| || ||||||||||||||| Sbjct 9399 CTTCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTTACAAAGATTTGCATA 9448 >seq7822 Length=21803 Score = 82.4 bits (90), Expect = 6e-11 Identities = 117/162 (72%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 131615 GGACACATTAGCGACCACACGCCGT-TCTGTTCAACTCGCTTCATAAACAAATCCGGCAC 131673 |||||||| |||||||| | ||| | ||| || |||||||||| ||||||||||| | Sbjct 9465 GGACACATAAGCGACCAAATTTCGTCTTTGTGCA-CTCGCTTCATGAACAAATCCGGAAT 9407 Query 131674 CCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAA 131733 ||| | | || |||| |||| || | ||||| | |||| || | || |||| Sbjct 9406 CCACAGGCCATAGAACAAGTCTCGTGCACGCTCTTCTTCAGCACCCGTATTCTTCTTCAG 9347 Query 131734 ATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATA 131775 | ||||| |||| || || |||||||| || |||||||| Sbjct 9346 CTCCAAAAATTCCATGATATCTGCATGCCACGGCTCCAAATA 9305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424856664891120