Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq8124 93.3 4e-14 seq8372 87.8 2e-12 seq14918 84.2 2e-11 >seq8124 Length=14328 Score = 93.3 bits (102), Expect = 4e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| |||| || ||| | || ||||||||||| ||| |||| Sbjct 7944 ATGCAAATTTTCGTGAAGACTTTGACGGGAAAGACGATCACTCTTGAAGTCGAAGCGTCG 8003 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| |||||| || || || ||||| || || || ||||| ||||| Sbjct 8004 GACACAATCGAGAATGTCAAAGCCAAGATCCAGGACAAGGAGGGAATCCCACCGGATCAG 8063 Query 27108 CAGCGTTTAAT 27118 |||||||| || Sbjct 8064 CAGCGTTTGAT 8074 >seq8372 Length=2112 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| | || || ||| | || ||||||||||| ||| |||| Sbjct 1272 ATGCAAATTTTCGTGAAGACTTTAACGGGAAAGACGATCACTCTTGAAGTCGAAGCGTCG 1331 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| |||||| || || || ||||| || || || ||||| ||||| Sbjct 1332 GACACAATCGAGAATGTCAAAGCCAAGATCCAGGACAAGGAGGGAATCCCACCGGATCAG 1391 Query 27108 CAGCGTTTAAT 27118 |||||||| || Sbjct 1392 CAGCGTTTGAT 1402 >seq14918 Length=33047 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||| ||||| | ||||| || |||||||| |||| Sbjct 400 ATGCAGATCTTCGTTAAGACACTGACTGGCAAAACAATTACGCTCGAAGTGGAGGCGTCT 459 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || ||||| ||||| ||||||||||| || || || || Sbjct 460 GACACCATCGAAAATGTGAAGGCTAAAATCCAAGATAAAGAAGGCATTCCGCCGGACCAG 519 Query 27108 CAGCGTTTAAT 27118 ||||| || || Sbjct 520 CAGCGATTGAT 530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434836798435200