Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02]
15,010 sequences; 90,131,014 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1685 134 2e-26
seq14012 87.8 2e-12
seq4940 87.8 2e-12
>seq1685
Length=49379
Score = 134 bits (148), Expect = 2e-26
Identities = 172/237 (73%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 77915 ATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCA 77974
||| ||| | ||||| ||||||||||| |||||||| ||||| || |||| || ||
Sbjct 5848 ATAAAGCTGATCAAACACATCTCCCCAACAATCATCCAGACCAGGACAATCATGAGGACA 5789
Query 77975 CATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAG 78034
|||||||||||| ||| || |||| ||||||||| ||||| || ||||| |
Sbjct 5788 CATCAATGACCACATTTGATCAGTCTCTACTCTTTTCATAAAAAGATCGGGAATCCACAA 5729
Query 78035 AGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAG 78094
|| ||||| ||||| | || | |||||| || |||||||||| || || ||
Sbjct 5728 TCCATAAAATAAATCTCTAGCTCGGTCTTCTTCTGACCCAATATTCTTTTTGAGCTCAAG 5669
Query 78095 AAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCG 78151
||| ||||||||||| | ||||||||| || | || || || | | | |||||||
Sbjct 5668 AAAATCCATAATATCTGCATGCCATGGCTCCAAGTAGATAGCAAAACCCGCAGGTCG 5612
>seq14012
Length=40231
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 48520 CAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAA 48579
|| ||||||||||||| || || |||||| |||||| || || || | ||| | | |
Sbjct 1927 CAACCAAATTCTCATTGACGATACCATCAGAAGCAGCGAAGAAGGCGAGAACACGAGTGA 1986
Query 48580 TAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTA 48639
||||| | || || ||||| || ||||| || ||| | ||||| | | ||| |
Sbjct 1987 TAAAAAAACGCTCACTGTCAGTCATGTTGTTCCAATCCTTGGTGTCTTTGGCAAGATCCA 2046
Query 48640 CTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGT 48699
| || || | ||||| ||||| | || || || || | ||| || || | ||
Sbjct 2047 CCTCCTCGACCACCCAAATAGATGCTACAGCCTTCTTGTAAAATGCCCAAATGTCCCAGT 2106
Query 48700 ATTGGATTGGGAAAATAACAAATCTATTTGGATTTT 48735
| ||||| || ||||| ||||| | |||||||||||
Sbjct 2107 ACTGGATCGGAAAAATCACAAAGCGATTTGGATTTT 2142
>seq4940
Length=754
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 48520 CAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAA 48579
|| ||||||||||||| || || |||||| |||||| || || || | ||| | | |
Sbjct 423 CAACCAAATTCTCATTGACGATACCATCAGAAGCAGCGAAGAAGGCGAGAACACGAGTGA 482
Query 48580 TAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTA 48639
||||| | || || ||||| || ||||| || ||| | ||||| | | ||| |
Sbjct 483 TAAAAAAACGCTCACTGTCAGTCATGTTGTTCCAATCCTTGGTGTCTTTGGCAAGATCCA 542
Query 48640 CTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGT 48699
| || || | ||||| ||||| | || || || || | ||| || || | ||
Sbjct 543 CCTCCTCGACCACCCAAATAGATGCTACAGCCTTCTTGTAAAATGCCCAAATGTCCCAGT 602
Query 48700 ATTGGATTGGGAAAATAACAAATCTATTTGGATTTT 48735
| ||||| || ||||| ||||| | |||||||||||
Sbjct 603 ACTGGATCGGAAAAATCACAAAGCGATTTGGATTTT 638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694538462766400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |