Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1685 131 2e-25 seq7822 91.5 2e-13 >seq1685 Length=49379 Score = 131 bits (144), Expect = 2e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||| ||||||||||| |||||||| ||||||||| |||| ||||||||||||||| Sbjct 5838 TCAAACACATCTCCCCAACAATCATCCAGACCAGGACAATCATGAGGACACATCAATGAC 5779 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 ||| ||| || || | ||||||||| ||||| || ||||| | || |||| Sbjct 5778 CACATTTGATCAGTCTCTACTCTTTTCATAAAAAGATCGGGAATCCACAATCCATAAAAT 5719 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 | ||||| | || |||||| || |||||||||| || || || || |||||| Sbjct 5718 AAATCTCTAGCTCGGTCTTCTTCTGACCCAATATTCTTTTTGAGCTCAAGAAAATCCATA 5659 Query 76700 ATATCAGAATGCCATGGTTC 76719 ||||| | ||||||||| || Sbjct 5658 ATATCTGCATGCCATGGCTC 5639 >seq7822 Length=21803 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 77354 GTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGT 77413 |||| ||||||||||| ||||| || |||| ||| || || | |||||||| |||||| Sbjct 7471 GTTTGTTTGTGTAGATTGGATACAGCAATTCGAGCTGCAAGCAAAGCATAGTCCGGATGT 7412 Query 77414 TGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACT 77473 | ||||| | ||||| | ||| || || ||| | || |||||||| ||||||||| Sbjct 7411 TTAGTAGTCATTGAAGCTGCCACTTCAGCTGCCAAATTGTCCAATTCTATTGTAGTAACT 7352 Query 77474 CCGTTATA 77481 || || || Sbjct 7351 CCTTTGTA 7344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712800635683200