Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Subanguina_20moxae_20[genbank_20GCA_5F000981365.1_202015-04-02] 15,010 sequences; 90,131,014 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1891 188 1e-42 seq8124 152 1e-31 seq8372 149 1e-30 seq14918 111 3e-19 seq10171 111 3e-19 seq14890 104 5e-17 seq13457 87.8 4e-12 >seq1891 Length=13189 Score = 188 bits (208), Expect = 1e-42 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| ||||| |||| ||| | ||| || || |||||||||||||| | | Sbjct 7893 CCTCCACGCAGACGAAGCACCAAATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCTGAA 7952 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| ||||||| || || |||||||| ||||| || |||||||| ||| Sbjct 7953 AGAGTTCGGCCGTCCTCTAACTGCTTACCGGCAAAAATCAATCGCTGTTGGTCTGGGGGA 8012 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||||||||| ||||| ||| | ||||||||||| ||||| ||| Sbjct 8013 ATGCCTTCCTTGTCTTGGATCTTGGCTTTGACGTTTTCGATAGTGTCGCTGGCTTCCACT 8072 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| || || | |||||| ||||| |||||||| Sbjct 8073 TCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTTACGAAGATCTGCAT 8119 Score = 179 bits (198), Expect = 8e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| ||||| |||||||| | ||| || || |||||||||||||| | | Sbjct 9221 CCTCCACGCAGACGAAGCACCAGATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAA 9280 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| ||||| | || || |||||||| ||||| || |||||||| ||| Sbjct 9281 AGAGTTCGGCCGTCCTCCAACTGCTTACCGGCAAAAATCAATCGCTGTTGGTCTGGGGGA 9340 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||||||||| ||||| ||| | ||||||||||| ||||| ||| Sbjct 9341 ATGCCTTCCTTGTCTTGGATCTTGGCTTTGACGTTTTCGATAGTGTCGCTGGCTTCCACT 9400 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| || || | |||||| || || || ||||| Sbjct 9401 TCCAAGGTGATGGTCTTGCCGGTGAGAGTCTTTACAAAGATTTGCAT 9447 Score = 89.7 bits (98), Expect = 1e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 |||| || ||||| |||||||| || |||||||| ||||| ||||||||||||||| Sbjct 9011 AGTTACTTACCGGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 9070 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTC 283039 ||||| ||||| ||| | ||||| ||||| Sbjct 9071 ATCTTGGCTTTCACGTTTTCGATGGTGTC 9099 Score = 84.2 bits (92), Expect = 5e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 |||| || ||||| |||||||| || |||||||| ||||| |||||||| |||||| Sbjct 8301 AGTTACTTACCGGCGAAGATCAATCGCTGTTGGTCTGGGGGAATGCCCTCCTTATCTTGG 8360 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTC 283039 ||||| ||||| ||| | ||||| ||||| Sbjct 8361 ATCTTGGCTTTCACGTTTTCGATGGTGTC 8389 >seq8124 Length=14328 Score = 152 bits (168), Expect = 1e-31 Identities = 122/147 (83%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || || |||||||||||||| || || || || || ||||||||||| |||||||| Sbjct 8086 TTACCAGCAAAGATCAAACGCTGCTGATCCGGTGGGATTCCCTCCTTGTCCTGGATCTTG 8027 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 ||||| || | ||||| |||||||| ||||||||||| |||||||||||||| |||||| Sbjct 8026 GCTTTGACATTCTCGATTGTGTCCGACGCTTCGACTTCAAGAGTGATCGTCTTTCCCGTC 7967 Query 283077 AAAGTCTTAACGAATATCTGCATTTTC 283103 |||||||| ||||| || ||||| ||| Sbjct 7966 AAAGTCTTCACGAAAATTTGCATATTC 7940 Score = 107 bits (118), Expect = 4e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || || ||||||||||| || || ||||| |||||| || || || |||||||| || Sbjct 9060 TTACCAGCAAAGATCAATCGCTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGGATTTTA 9001 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 || || || | ||||| ||||| || || || |||||||| || || || || || ||| Sbjct 9000 GCCTTCACATTTTCGATGGTGTCAGACGCCTCCACTTCGAGCGTAATTGTTTTGCCAGTC 8941 Query 283077 AAAGTCTTAACGAATATCTGCATT 283100 | ||||||||||| |||| |||| Sbjct 8940 AGTGTCTTAACGAAGATCTACATT 8917 Score = 104 bits (114), Expect = 5e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || || || ||||| || || ||||| |||||||||||||||||| |||||||| || Sbjct 8367 CCTGCGAAAATCAAGCGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGATCTTAGCC 8308 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 || ||| | |||||||| || || || || || || || || || ||||| || || | Sbjct 8307 TTGACGTTCTCGATAGTATCAGATGCCTCTACCTCCAGGGTAATGGTCTTGCCAGTGAGC 8248 Query 283080 GTCTTAACGAATATCTGCAT 283099 ||||| ||||| || ||||| Sbjct 8247 GTCTTCACGAAGATTTGCAT 8228 Score = 87.8 bits (96), Expect = 4e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 ||||| ||||||||||| || ||||| || || || | || || ||||| || || || Sbjct 8623 GGAATGCCCTCCTTGTCCTGAATCTTAGCCTTGACATTCTCAATGGTGTCAGACGCCTCC 8564 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 |||||||| || || ||||| || ||||| ||||| || || || |||||| Sbjct 8563 ACTTCGAGCGTAATTGTCTTGCCAGTCAATGTCTTGACAAAGATTTGCATT 8513 >seq8372 Length=2112 Score = 149 bits (164), Expect = 1e-30 Identities = 121/147 (82%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || || |||||||||||||| || || || || || ||||||||||| |||||||| Sbjct 1414 TTACCAGCAAAGATCAAACGCTGCTGATCCGGTGGGATTCCCTCCTTGTCCTGGATCTTG 1355 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 ||||| || | ||||| |||||||| ||||||||||| |||||||||||||| ||||| Sbjct 1354 GCTTTGACATTCTCGATTGTGTCCGACGCTTCGACTTCAAGAGTGATCGTCTTTCCCGTT 1295 Query 283077 AAAGTCTTAACGAATATCTGCATTTTC 283103 |||||||| ||||| || ||||| ||| Sbjct 1294 AAAGTCTTCACGAAAATTTGCATATTC 1268 Score = 111 bits (122), Expect = 3e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || || || ||||| || || ||||| |||||||||||||||||| |||||||| || Sbjct 1989 CCTGCGAAAATCAAGCGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGATCTTAGCC 1930 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 || ||| | |||||||| || || || || || || || ||||| ||||| || || | Sbjct 1929 TTGACGTTCTCGATAGTATCAGATGCCTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGC 1870 Query 283080 GTCTTAACGAATATCTGCATT 283100 ||||| || ||||| |||||| Sbjct 1869 GTCTTCACAAATATTTGCATT 1849 Score = 109 bits (120), Expect = 1e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || || || ||||| || || ||||| |||||||||||||||||| |||||||| || Sbjct 1700 CCTGCGAAAATCAAGCGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGATCTTAGCC 1641 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 || ||| | |||||||| || || || || || || || ||||| ||||| || || | Sbjct 1640 TTGACGTTCTCGATAGTATCAGATGCCTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGC 1581 Query 283080 GTCTTAACGAATATCTGCAT 283099 ||||| || ||||| ||||| Sbjct 1580 GTCTTCACAAATATTTGCAT 1561 >seq14918 Length=33047 Score = 111 bits (122), Expect = 3e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || || ||||||||||| || || ||||| |||||| || || || |||||||| || Sbjct 542 TTACCAGCAAAGATCAATCGCTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGGATTTTA 483 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 || || || | ||||| ||||| || || || |||||||| || || || || || ||| Sbjct 482 GCCTTCACATTTTCGATGGTGTCAGACGCCTCCACTTCGAGCGTAATTGTTTTGCCAGTC 423 Query 283077 AAAGTCTTAACGAATATCTGCATT 283100 | ||||||||||| ||||||||| Sbjct 422 AGTGTCTTAACGAAGATCTGCATT 399 Score = 98.7 bits (108), Expect = 2e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || || || ||||| || || ||||| |||||| ||||||||||| || ||||| || Sbjct 135 CCTGCGAAAATCAAGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGAATCTTAGCC 76 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 || ||| | || || ||||| || || || |||||||| || || ||||| || ||||| Sbjct 75 TTAACGTTCTCAATGGTGTCAGACGCCTCCACTTCGAGCGTAATTGTCTTGCCAGTCAAT 16 Query 283080 GTCTTAACGAATAT 283093 ||||| || || || Sbjct 15 GTCTTGACAAAGAT 2 >seq10171 Length=5186 Score = 111 bits (122), Expect = 3e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || || || ||||| || || ||||| |||||||||||||||||| |||||||| || Sbjct 351 CCTGCGAAAATCAAGCGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGATCTTAGCC 292 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 || ||| | |||||||| || || || || || || || ||||| ||||| || || | Sbjct 291 TTGACGTTCTCGATAGTATCAGATGCCTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGC 232 Query 283080 GTCTTAACGAATATCTGCATT 283100 ||||| || ||||| |||||| Sbjct 231 GTCTTCACAAATATTTGCATT 211 Score = 111 bits (122), Expect = 3e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || || ||||||||||| || || || || |||||| ||||||||||| || ||||| Sbjct 639 TTACCAGCAAAGATCAATCGCTGCTGATCTGGCGGAATGCCCTCCTTGTCCTGAATCTTG 580 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 || || ||| | ||||| ||||| || || || |||||||| || || ||||| || ||| Sbjct 579 GCCTTGACGTTCTCGATGGTGTCAGACGCCTCCACTTCGAGCGTAATTGTCTTGCCAGTC 520 Query 283077 AAAGTCTTAACGAATATCTGCATT 283100 | ||||| || || || |||||| Sbjct 519 AGTGTCTTGACAAAGATTTGCATT 496 >seq14890 Length=108563 Score = 104 bits (114), Expect = 5e-17 Identities = 90/112 (80%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 ||||| || |||||||| || ||||| || || || | ||||| ||||||||||| ||| Sbjct 69712 GGAATTCCTTCCTTGTCCTGAATCTTAGCCTTCACATTCTCGATTGTGTCCGAAGCCTCG 69653 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTT 283101 ||||| | ||||||||||| |||||||| || || || || || ||||||| Sbjct 69652 ACTTCCAACGTGATCGTCTTGCCCGTCAATGTTTTGACAAAGATTTGCATTT 69601 >seq13457 Length=26911 Score = 87.8 bits (96), Expect = 4e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || ||||||||||| | ||||| ||||| ||||| ||||| ||||| |||||||| Sbjct 22219 TTACCGGCAAAGATAAGCCGTTGCTGGTCTGGTGGAATGCCCTCTTTGTCCTGGATCTTG 22160 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTC 283054 |||||||| | || ||||| ||||| || |||||||| Sbjct 22159 GCTTTTACATTCTCAATAGTATCCGAGGCCTCGACTTC 22122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046537895696540