Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Syphacia_20muris_20[genbank_20GCA_5F000939275.1_202014-09-24] 3,879 sequences; 99,093,317 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq205 82.4 7e-11 >seq205 Length=94112 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 50406 CTAAATCACGCCGTTTTACTCGTAGGCTACGGAATCGAAAACGACACACCGTATTGGATA 50465 ||| |||||| |||||| |||| || ||||| || || |||| ||| |||||||| Sbjct 78428 CTAGATCACGGAGTTTTAATCGTTGGTTACGGCTCGGAGAATGACAAACCATATTGGATC 78487 Query 50466 TTTAAAAACAGTTGGGGATCGAATTGGGGCGAAAACGGATACTTTAGA 50513 | |||||||||||||| |||||||| |||||||| || || ||| Sbjct 78488 GTCAAAAACAGTTGGGGTAAAAATTGGGGTGAAAACGGTTATTTCAGA 78535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445744785901680