Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Syphacia_20muris_20[genbank_20GCA_5F000939275.1_202014-09-24] 3,879 sequences; 99,093,317 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq263 82.4 9e-11 >seq263 Length=84048 Score = 82.4 bits (90), Expect = 9e-11 Identities = 100/136 (74%), Gaps = 3/136 (2%) Strand=Plus/Minus Query 75924 TGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGA 75983 ||||||| |||||| ||||| ||||||||||| | |||||||| ||||| | | Sbjct 19480 TGCTTTA---GGATGCATGTAATCGAAAGAGTAACCAGCAAAATTTGGGCACAATAAGGT 19424 Query 75984 GCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCA 76043 |||||| | || || |||||| | |||||| ||| ||||| |||||||| | Sbjct 19423 CATCAAATTTATGTACTGAAATTGTGGAGTACTGTAGTAAAGATGAAGTTGCTGTTTGTA 19364 Query 76044 ATTTGGCATCAATCGC 76059 |||||| ||| ||||| Sbjct 19363 ATTTGGGATCTATCGC 19348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596540673831520