Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Syphacia_20muris_20[genbank_20GCA_5F000939275.1_202014-09-24] 3,879 sequences; 99,093,317 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq82 113 4e-20 >seq82 Length=127425 Score = 113 bits (124), Expect = 4e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || |||| |||||||||||||| || || || || | | Sbjct 56372 ATGCAGATTTTTGTAAAGACTTTAACTGGTAAAACTATTACACTTGATGTTGAGTCTTCT 56313 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| |||||| ||||||||||||||||||||| || || || || || Sbjct 56312 GACACAATCGAAAATGTAAAAGCAAAGATCCAAGACAAAGAAGGCATTCCGCCAGACCAG 56253 Query 24824 CAACGTTTGATCTTTGCCGG 24843 ||||| || || |||||||| Sbjct 56252 CAACGGTTAATTTTTGCCGG 56233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449875785590120