Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Syphacia_20muris_20[genbank_20GCA_5F000939275.1_202014-09-24] 3,879 sequences; 99,093,317 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq84 86.0 1e-11 >seq84 Length=125161 Score = 86.0 bits (94), Expect = 1e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||||||| | |||||||| ||||| ||||||||||| ||||||| || | | Sbjct 124902 TGCAAATATTCGTGAAAACATTGACAGGCAAAACAATTACCCTTGATGTCGAGTCTTCAG 124961 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | || || ||| || || ||| || || || || || || || || | Sbjct 124962 ACACAATTGAGAACGTGAAAGCCAAGATTCAAGACAAGGAGGGAATCCCGCCAGAGCAGC 125021 Query 146152 AAAGACTCATTTTTGCAGGT 146171 |||| ||||||||||| ||| Sbjct 125022 AAAGGCTCATTTTTGCTGGT 125041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786128280756680