Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Syphacia_20muris_20[genbank_20GCA_5F000939275.1_202014-09-24] 3,879 sequences; 99,093,317 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq82 109 4e-19 >seq82 Length=127425 Score = 109 bits (120), Expect = 4e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 29647 CCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT 29706 || ||| | || || | |||||| || |||||||| || ||||||||||| | ||| | Sbjct 56233 CCGGCAAAAATTAACCGTTGCTGGTCTGGCGGAATGCCTTCTTTGTCTTGGATCTTTGCT 56292 Query 29707 TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAG 29766 || ||| |||| | ||||||||| || || ||||| || |||||||| |||||||| Sbjct 56293 TTTACATTTTCGATTGTGTCAGAAGACTCAACATCAAGTGTAATAGTTTTACCAGTTAAA 56352 Query 29767 GTTTTAACAAATATCTGCAT 29786 || || ||||| |||||||| Sbjct 56353 GTCTTTACAAAAATCTGCAT 56372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385200988641939