Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Syphacia_20muris_20[genbank_20GCA_5F000939275.1_202014-09-24] 3,879 sequences; 99,093,317 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq82 100 7e-16 >seq82 Length=127425 Score = 100 bits (110), Expect = 7e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049 ||||| ||||| || |||| ||||| ||||| ||||||||| ||| || |||||||| Sbjct 56248 CGTTGCTGGTCTGGCGGAATGCCTTCTTTGTCTTGGATCTTTGCTTTTACATTTTCGATT 56307 Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109 |||||||| ||||| || || || || || || || || | |||||||||||| | | Sbjct 56308 GTGTCAGAAGACTCAACATCAAGTGTAATAGTTTTACCAGTTAAAGTCTTTACAAAAATC 56367 Query 211110 TGCAT 211114 ||||| Sbjct 56368 TGCAT 56372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159094390507835