Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24] 5,778 sequences; 75,392,092 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq119 104 2e-17 >seq119 Length=100056 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 102061 CTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATC 102120 |||||| ||||| ||||| || | ||||||||| ||| | |||||||||||| || Sbjct 84352 CTGAAACCCATATACAGGCCCTAAATCTCCTTCTGCTCGATTGGTAAAACCAAGTTTGTC 84293 Query 102121 TAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGAT-AGCTCTT 102179 | |||| |||||| ||||| |||| ||| || | || || | ||| | | || Sbjct 84292 GAGAAATTGTCTAGAACCATTTGCATTCCAGATTTTAACACCTTTCTCAGATAAATTATT 84233 Query 102180 TGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATA 102239 ||| | ||| ||||| ||||||||||||||||| ||||||||||| ||||||| | Sbjct 84232 TGC-ATTTGTATCTCCTCGAATAAACCACAACAGTTCCTCAACAACACCCTTCCAAAAAA 84174 Query 102240 CTCTCTTAGTAGTTAAAAGTGGAA 102263 | || || |||| || |||| Sbjct 84173 TGCGTTTTGTTGTTAGCAGAGGAA 84150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361225760916278