Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24]
5,778 sequences; 75,392,092 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq119 104 2e-17
>seq119
Length=100056
Score = 104 bits (114), Expect = 2e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 102061 CTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATC 102120
|||||| ||||| ||||| || | ||||||||| ||| | |||||||||||| ||
Sbjct 84352 CTGAAACCCATATACAGGCCCTAAATCTCCTTCTGCTCGATTGGTAAAACCAAGTTTGTC 84293
Query 102121 TAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGAT-AGCTCTT 102179
| |||| |||||| ||||| |||| ||| || | || || | ||| | | ||
Sbjct 84292 GAGAAATTGTCTAGAACCATTTGCATTCCAGATTTTAACACCTTTCTCAGATAAATTATT 84233
Query 102180 TGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATA 102239
||| | ||| ||||| ||||||||||||||||| ||||||||||| ||||||| |
Sbjct 84232 TGC-ATTTGTATCTCCTCGAATAAACCACAACAGTTCCTCAACAACACCCTTCCAAAAAA 84174
Query 102240 CTCTCTTAGTAGTTAAAAGTGGAA 102263
| || || |||| || ||||
Sbjct 84173 TGCGTTTTGTTGTTAGCAGAGGAA 84150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361225760916278
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |