Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24] 5,778 sequences; 75,392,092 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq119 84.2 2e-11 >seq119 Length=100056 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/203 (70%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 97426 TGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCT 97485 || || ||||| ||||| || | ||||||||| ||| || |||||||| || || Sbjct 84351 TGAAACCCATATACAGGCCCTAAATCTCCTTCTGCTCGATTGGTAAAACCAAGTTTGTCG 84292 Query 97486 AAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGC-AAGCTCTTT 97544 | | | ||||| |||||||||| ||| || | ||||| | | || | ||| Sbjct 84291 AGAAATTGTCTAGAACCATTTGCATTCCAGATTTTAACACCTTTCTCAGATAAATTATTT 84232 Query 97545 GCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATAC 97604 || | ||| ||||| ||||||||||||| ||| || |||||||| ||||||| | Sbjct 84231 GCATTT-GTATCTCCTCGAATAAACCACAACAGTTCCTCAACAACACCCTTCCAAAAAAT 84173 Query 97605 TCTCTTAGTTGTTAAGAGAGGAA 97627 | || ||||||| ||||||| Sbjct 84172 GCGTTTTGTTGTTAGCAGAGGAA 84150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346759579687460