Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24] 5,778 sequences; 75,392,092 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq558 86.0 1e-11 >seq558 Length=40418 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/129 (76%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 135700 GCAAATACGTTAGCAAAAATAGCTAATGGTATATGCGATAATTTACTGACGTCTATTGTA 135759 |||||| || | || ||||| || |||||||||||||| |||||| || ||||||||| Sbjct 35659 GCAAATTCGCTGGCTAAAATTGCAAATGGTATATGCGACAATTTATTGTTGTCTATTGTT 35718 Query 135760 AGAGCCTGGGATACAAACAAACCACTCATTTTCTG-TCCTGCAATGAATACTCTTATGTG 135818 | || |||||| || ||||| | || || || ||| ||||||||| | ||||| Sbjct 35719 CGCGCATGGGATCCACGAAAACC-TTTATATTATGCTCCGGCAATGAATGTTGCCATGTG 35777 Query 135819 GGAACATCC 135827 |||| |||| Sbjct 35778 GGAAAATCC 35786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923130122111120