Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24] 5,778 sequences; 75,392,092 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq22 82.4 5e-11 >seq22 Length=171845 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 ||||| || || |||||||| ||||| ||| | || ||||||||||| || || ||| Sbjct 88158 TCTTTTTGAATATTGTAGTCAGACAGTGTGCGGCCATCTTCCAACTGCTTTCCGGCAAAA 88217 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATC 34317 || | || || || || || | || |||||| || ||| || ||||| | || Sbjct 88218 ATCAATCGTTGTTGATCTGGTGGGATGCCCTCCTTATCCTGAATC-TTGGCTTTGACATT 88276 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | |||| ||| | | || || |||| ||||| || ||||| || || ||||| || Sbjct 88277 TTCAATCGTATCAGAAGCCTCTACCTCCAAAGTGATCGTCTTGCCAGTCAGCGTTTTGAC 88336 Query 34378 AAAGATCTGCAT 34389 ||| |||||||| Sbjct 88337 AAATATCTGCAT 88348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323049249471680