Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24]
5,778 sequences; 75,392,092 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq22 95.1 9e-15
>seq22
Length=171845
Score = 95.1 bits (104), Expect = 9e-15
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 18096 TATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCG 18155
|| || || || || | || |||| |||||||| || ||||||||||| ||||||||
Sbjct 88119 TAGCCACCACGAAGACGGAGAACCAAATGAAGTGTGGACTCTTTTTGAATATTGTAGTCA 88178
Query 18156 GCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACG 18215
| || ||| | ||||||||| || || || ||| | || | || |||||||||
Sbjct 88179 GACAGTGTGCGGCCATCTTCCAACTGCTTTCCGGCAAAAATCAATCGTTGTTGATCTGGT 88238
Query 18216 GGCACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTC 18274
|| | ||| |||||||| ||| | | || ||||| | | ||| || ||| | |||
Sbjct 88239 GGGATGCCCTCCTTATCCTGAATCT-TGGCTTTGACATTTTCAATCGTATCAGAAGCCTC 88297
Query 18275 GGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| | ||||| | ||||| |||| ||||| ||||| || |||||
Sbjct 88298 TACCTCCAAAGTGATCGTCTTGCCAGTCAGCGTTTTGACAAATATCTGCAT 88348
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379317286832610
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |