Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24]
5,778 sequences; 75,392,092 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq222 98.7 1e-15
seq532 84.2 3e-11
>seq222
Length=74321
Score = 98.7 bits (108), Expect = 1e-15
Identities = 71/82 (87%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 35866 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATT 35925
|||||||||||||| ||||||||||| |||||||| ||||| ||||| | |||||||
Sbjct 45002 TTTTTGGTATTCACTGACACGTTTTTCAAAAAAATTGGTTTTTCCTTCCACTGATATACG 45061
Query 35926 TTCCATGAAATCGAATGGATTG 35947
|||||| |||||||| ||||||
Sbjct 45062 TTCCATAAAATCGAAAGGATTG 45083
>seq532
Length=41884
Score = 84.2 bits (92), Expect = 3e-11
Identities = 102/139 (73%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 65971 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGAC 66030
|||| | || |||||| || || |||||||| | || || ||||||| |||| | ||||
Sbjct 30716 TATAAAGTCTTTCGAATTCTTCACCCCAAACTTCGTGCAGACCAGGACTTTCAGCAGGAC 30657
Query 66031 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 66090
|||||| ||||| | |||||| || || | |||||| ||||| |||| ||| |
Sbjct 30656 ACATCAGTGACCAAGTTTTGTCATCGCGAACACGCTCCATAAAAAGATCGGGAACCCATA 30597
Query 66091 GAGCTATAAATAAATCTCT 66109
| | ||||||||||||
Sbjct 30596 AGCCAAGAAATAAATCTCT 30578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658125263469520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |