Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24]
5,778 sequences; 75,392,092 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq22 100 3e-16
>seq22
Length=171845
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596
||| || || | ||| | ||| || |||| || |||||||||||||| || || ||
Sbjct 88121 GCCACCACGAAGACGGAGAACCAAATGAAGTGTGGACTCTTTTTGAATATTGTAGTCAGA 88180
Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
|| ||||| ||||| | ||| || || ||| | |||| ||||| ||||| || ||
Sbjct 88181 CAGTGTGCGGCCATCTTCCAACTGCTTTCCGGCAAAAATCAATCGTTGTTGATCTGGTGG 88240
Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715
||||| || || || ||| | || | ||| | | ||| | || || | | ||| |
Sbjct 88241 GATGCCCTCCTTATC-CTGAATCTTGGCTTTGACATTTTCAATCGTATCAGAAGCCTCTA 88299
Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||| | || | ||||||||| |||| |||||| || ||||| |||||
Sbjct 88300 CCTCCAAAGTGATCGTCTTGCCAGTCAGCGTTTTGACAAATATCTGCAT 88348
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496028171777600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |